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p26-a

Euk-Vir

Apocheima_cinerarium_nucleopolyhedrovirus

p26-a__YP_006607871__Apocheima_cinerarium_nucleopolyhedrovirus__307461

Identity

Accession:: YP_006607871 ↗
Protein ID:: p26-a
Kingdom:: euk

Quality

88.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Apocheima_cinerarium_nucleopolyhedrovirus

TaxID: 307461

Cluster

View cluster (50 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-180

PDB

Domain cluster: rep: P26B__YP_009250032__Urbanus_proteus_nucleopolyhedrovirus__1675866__D19-171

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04766.19 best	Baculo_p26	195.5	1.50e-57	98.1%	65.3%

D2 high residues 186-265

PDB

Domain cluster: rep: p26__NP_613192__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D180-240

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04766.19 best	Baculo_p26	71.5	1.10e-19	100.0%	30.1%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4s39A02	3.30.413.10	Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1	0.61	36.0	3.20e-01	98.8%	40.5%
3hrgA02	3.30.420.260	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain	0.61	35.0	3.13e-01	85.0%	39.5%
2it9A00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.60	39.0	3.37e-01	88.7%	44.2%
1llnA01	3.40.420.10	Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1	0.55	40.0	3.21e-01	78.8%	82.9%
1ealA00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.53	32.0	2.76e-01	100.0%	37.0%
8fazD01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.51	43.0	3.20e-01	97.5%	88.3%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2716360	7063.1.1.1 ↗	a/b three-layered sandwiches › C-terminal domain of poxin › C-terminal domain of poxin › C-terminal domain of poxin › Baculo_p26	0.94	76.0	7.96e-01	100.0%	91.8%
3008893	7063.1.1.1 ↗	a/b three-layered sandwiches › C-terminal domain of poxin › C-terminal domain of poxin › C-terminal domain of poxin › Baculo_p26	0.86	80.0	7.83e-01	100.0%	92.9%
224047	6043.1.1.3 ↗	a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N	0.60	39.0	4.30e-01	82.5%	81.8%
1157731	6043.1.1.3 ↗	a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N	0.57	39.0	3.99e-01	83.7%	72.2%
3716134	7575.1.1.0 ↗	a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like	0.56	46.0	3.13e-01	100.0%	25.5%
3457419	244.1.1.0 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C	0.55	39.0	3.55e-01	97.5%	56.2%
5048528	268.1.1.0 ↗	a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related	0.53	36.0	3.23e-01	86.3%	49.6%
3277886	225.1.1.3 ↗	a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c	0.52	36.0	3.04e-01	77.5%	41.3%
3255906	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.52	43.0	3.47e-01	100.0%	47.3%
5016773	2484.1.1.21 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG	0.52	42.0	3.40e-01	87.5%	78.0%
5015817	2484.1.1.334 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1786	0.52	43.0	2.82e-01	88.7%	78.4%
3387142	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.51	40.0	3.01e-01	85.0%	58.4%
3227515	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.50	33.0	2.81e-01	100.0%	41.1%
3727689	2008.1.1.143 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924	0.50	39.0	2.81e-01	85.0%	76.3%
3728191	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.50	46.0	3.49e-01	100.0%	51.1%