←Back to structures
p30-like_movement_protein
Euk-VirDiuris_virus_A
p30-like_movement_protein__YP_006905851__Diuris_virus_A__1247115
Identity
- Accession:
- YP_006905851 ↗
- Protein ID:
- p30-like_movement_protein
- Kingdom:
- euk
Quality
67.9
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Tymovirales›
Betaflexiviridae›
Divavirus›
Diuris_virus_A
TaxID: 1247115
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-272
Domain cluster:
rep: movement_protein__YP_009505633__Caucasus_prunus_virus__1667230__D7-263
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01107.24 best | MP | 53.0 | 4.60e-14 | 68.5% | 88.5% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.70 | 39.0 | 5.16e-01 | 95.1% | 96.0% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.68 | 43.0 | 5.10e-01 | 96.6% | 88.4% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 49.0 | 4.62e-01 | 76.8% | 95.8% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 35.0 | 4.72e-01 | 87.6% | 100.0% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 48.0 | 4.61e-01 | 77.9% | 95.1% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 39.0 | 4.86e-01 | 85.0% | 99.4% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 43.0 | 5.07e-01 | 78.3% | 100.0% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 42.0 | 5.00e-01 | 90.3% | 100.0% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 43.0 | 4.43e-01 | 79.0% | 75.3% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 40.0 | 4.25e-01 | 86.9% | 75.5% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 34.0 | 4.36e-01 | 85.0% | 97.4% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 41.0 | 4.45e-01 | 78.7% | 88.2% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 39.0 | 4.25e-01 | 80.9% | 82.6% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 41.0 | 4.25e-01 | 89.9% | 80.9% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 4.21e-01 | 80.9% | 81.4% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 32.0 | 4.15e-01 | 70.0% | 99.4% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 41.0 | 4.08e-01 | 79.4% | 75.1% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 34.0 | 4.15e-01 | 88.8% | 96.0% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 4.71e-01 | 89.5% | 100.0% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 4.15e-01 | 82.0% | 79.6% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 4.11e-01 | 80.9% | 76.2% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 4.37e-01 | 88.0% | 90.2% |
| 2ws9100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 4.38e-01 | 85.0% | 89.4% |
| 1g43A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.52 | 32.0 | 3.97e-01 | 94.4% | 98.8% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.52 | 21.0 | 3.37e-01 | 86.9% | 98.0% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 4.08e-01 | 83.9% | 79.7% |
| 4nehA05 | 2.60.40.1530 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 | 0.50 | 33.0 | 3.89e-01 | 86.9% | 96.1% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3376950 | 11.1.4.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › MP | 0.80 | 36.0 | 5.55e-01 | 73.0% | 100.0% |
| 3716837 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.72 | 37.0 | 5.19e-01 | 70.0% | 99.2% |
| 297441 | 10.2.1.19 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Bromo_coat | 0.69 | 40.0 | 4.99e-01 | 94.8% | 90.3% |
| 3614575 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 38.0 | 5.04e-01 | 79.4% | 98.6% |
| 3714782 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 37.0 | 5.04e-01 | 97.8% | 100.0% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.66 | 48.0 | 4.50e-01 | 73.4% | 87.6% |
| 3451794 | 10.2.1.72 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA | 0.66 | 40.0 | 5.03e-01 | 74.5% | 99.4% |
| 3022795 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.66 | 48.0 | 3.95e-01 | 73.8% | 89.4% |
| 3561036 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 37.0 | 4.33e-01 | 86.5% | 75.4% |
| 2099165 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.64 | 48.0 | 4.39e-01 | 76.8% | 83.9% |
| 2982736 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.62 | 43.0 | 4.59e-01 | 89.9% | 79.3% |
| 296002 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.61 | 43.0 | 5.02e-01 | 90.3% | 100.0% |
| 3172636 | 543.1.1.7 ↗ | few secondary structure elements › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Mid1 | 0.60 | 33.0 | 4.42e-01 | 83.1% | 97.2% |
| 1697855 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.59 | 40.0 | 4.25e-01 | 86.9% | 75.5% |
| 1866052 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.59 | 38.0 | 4.21e-01 | 81.3% | 80.8% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.58 | 40.0 | 4.25e-01 | 81.3% | 76.8% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.56 | 40.0 | 4.26e-01 | 80.9% | 80.7% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.55 | 41.0 | 4.25e-01 | 89.9% | 80.9% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.55 | 46.0 | 4.79e-01 | 87.3% | 95.2% |
| 3390703 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 4.23e-01 | 91.4% | 92.3% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.53 | 42.0 | 4.11e-01 | 80.9% | 76.2% |
| 2579094 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.52 | 40.0 | 4.06e-01 | 80.9% | 78.9% |
| 152483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.52 | 41.0 | 4.11e-01 | 81.3% | 88.9% |
| 3307728 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.52 | 30.0 | 3.75e-01 | 73.8% | 91.3% |
| 140694 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.52 | 42.0 | 4.36e-01 | 85.0% | 89.8% |
| 2982737 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.52 | 41.0 | 4.11e-01 | 83.1% | 79.1% |
| 2726763 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.51 | 41.0 | 4.11e-01 | 83.1% | 81.4% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.51 | 41.0 | 4.08e-01 | 83.9% | 79.7% |
| 5033996 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 32.0 | 3.31e-01 | 99.6% | 65.7% |
| 3695165 | 11.2.1.62 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF29106 | 0.50 | 28.0 | 3.37e-01 | 80.9% | 78.9% |