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p31K_protein
Euk-VirShort-finned_eel_ranavirus
p31K_protein__YP_009259412__Short-finned_eel_ranavirus__638660
Identity
- Accession:
- YP_009259412 ↗
- Protein ID:
- p31K_protein
- Kingdom:
- euk
Quality
74.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
Short-finned_eel_ranavirus
TaxID: 638660
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-234
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10927.14 best | DUF2738 | 337.3 | 5.10e-101 | 99.6% | 94.1% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 30.0 | 4.75e-01 | 73.3% | 100.0% |
| 4jg2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 48.0 | 5.38e-01 | 90.9% | 91.9% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 32.0 | 4.65e-01 | 73.7% | 98.2% |
| 5jpnC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 33.0 | 4.03e-01 | 81.9% | 74.5% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 32.0 | 4.45e-01 | 84.9% | 100.0% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 31.0 | 4.40e-01 | 88.8% | 99.1% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 17.0 | 2.65e-01 | 84.5% | 66.3% |
| 6vg3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 21.0 | 3.25e-01 | 71.1% | 92.2% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 27.0 | 3.74e-01 | 83.6% | 100.0% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 24.0 | 3.30e-01 | 87.1% | 90.8% |
| 1u4dA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 20.0 | 3.06e-01 | 76.7% | 91.6% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 17.0 | 2.51e-01 | 84.1% | 65.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4486408 | 2.1.1.326 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF5482 | 0.86 | 53.0 | 6.74e-01 | 90.9% | 98.6% |
| 3380367 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 61.0 | 6.65e-01 | 89.2% | 95.9% |
| 2132736 | 2.1.1.53 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Enc34_ssDNA-bd | 0.71 | 49.0 | 5.58e-01 | 90.9% | 90.5% |
| 235847 | 2.1.1.53 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Enc34_ssDNA-bd | 0.70 | 47.0 | 5.45e-01 | 78.4% | 91.3% |
| 3472467 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.59 | 21.0 | 3.53e-01 | 70.3% | 93.3% |
| 3924081 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.58 | 34.0 | 4.29e-01 | 88.8% | 94.3% |
| 3993916 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 18.0 | 2.57e-01 | 84.9% | 53.6% |
| 4318001 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 24.0 | 3.36e-01 | 70.3% | 81.7% |
| 153856 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.53 | 28.0 | 3.81e-01 | 83.6% | 99.2% |
| 5038245 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.52 | 27.0 | 3.75e-01 | 81.0% | 100.0% |