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p40
Euk-VirCondylorrhiza_vestigialis_MNPV
p40__YP_009118533__Condylorrhiza_vestigialis_MNPV__1592576
Identity
- Accession:
- YP_009118533 ↗
- Protein ID:
- p40
- Kingdom:
- euk
Quality
62.6
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Condylorrhiza_vestigialis_mutiple_nucleopolyhedrovirus
TaxID: 1592576
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-59
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05815.18 best | AcMNPV_Orf101 | 60.2 | 2.70e-16 | 100.0% | 15.6% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 38.0 | 3.54e-01 | 78.9% | 48.0% |
| 3s6pG00 | 6.10.140.1660 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 40.0 | 3.84e-01 | 75.4% | 97.2% |
| 3qfeB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 46.0 | 3.07e-01 | 96.5% | 91.7% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.58 | 48.0 | 4.10e-01 | 100.0% | 82.2% |
| 3d0cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 3.04e-01 | 100.0% | 80.7% |
| 3efzB00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.56 | 49.0 | 3.29e-01 | 100.0% | 39.6% |
| 1z2iA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.56 | 46.0 | 4.00e-01 | 96.5% | 63.4% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 39.0 | 2.96e-01 | 87.7% | 37.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3985609 | 304.55.1.8 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › TrwC | 0.53 | 44.0 | 3.32e-01 | 100.0% | 91.3% |
| 3725619 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.52 | 44.0 | 2.83e-01 | 98.2% | 19.7% |
| 3693035 | 603.1.1.19 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N | 0.50 | 36.0 | 2.39e-01 | 78.9% | 30.9% |
D2
high
residues 116-222
Domain cluster:
rep: P40__YP_009552645__Operophtera_brumata_nucleopolyhedrovirus__1046267__D105-208
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05815.18 best | AcMNPV_Orf101 | 148.3 | 4.30e-43 | 100.0% | 30.0% |