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p47
Euk-VirSpodoptera_frugiperda_granulovirus
p47__YP_009121848__Spodoptera_frugiperda_granulovirus__307454
Identity
- Accession:
- YP_009121848 ↗
- Protein ID:
- p47
- Kingdom:
- euk
Quality
75.9
mean pLDDT
Taxonomy
TaxID: 307454
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-96
Domain cluster:
rep: P47__YP_008378460__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D1-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05112.18 best | Baculo_p47 | 66.3 | 5.50e-18 | 93.8% | 29.4% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5optY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 4.82e-01 | 94.8% | 71.5% |
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 37.0 | 3.66e-01 | 83.3% | 56.0% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 48.0 | 4.91e-01 | 87.5% | 89.2% |
| 4d53A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.60 | 38.0 | 3.47e-01 | 77.1% | 46.6% |
| 2g1dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 41.0 | 4.13e-01 | 70.8% | 88.8% |
| 2xzmP00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 51.0 | 4.53e-01 | 100.0% | 82.4% |
| 5xyiY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 4.42e-01 | 90.6% | 75.2% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.57 | 44.0 | 3.84e-01 | 83.3% | 70.2% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 44.0 | 3.25e-01 | 95.8% | 60.3% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.67e-01 | 70.8% | 100.0% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 39.0 | 4.06e-01 | 79.2% | 100.0% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.51 | 36.0 | 3.55e-01 | 74.0% | 100.0% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 3.65e-01 | 74.0% | 100.0% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 35.0 | 2.76e-01 | 72.9% | 84.0% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 3.18e-01 | 85.4% | 46.7% |
| 3os6C00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.50 | 43.0 | 2.98e-01 | 100.0% | 66.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3184468 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.73 | 43.0 | 3.00e-01 | 86.5% | 19.3% |
| 3164555 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 53.0 | 4.58e-01 | 80.2% | 51.3% |
| 3385504 | 872.11.1.1 ↗ | a+b two layers › Dodecin subunit-like › Hypothetical protein FTT_1539c › Hypothetical protein FTT_1539c › DUF6844 | 0.64 | 56.0 | 3.80e-01 | 100.0% | 97.9% |
| 4096139 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.63 | 50.0 | 5.13e-01 | 86.5% | 87.2% |
| 4930580 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.63 | 48.0 | 4.74e-01 | 87.5% | 76.7% |
| 4296415 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.62 | 46.0 | 4.63e-01 | 85.4% | 76.0% |
| 5058995 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.62 | 49.0 | 4.97e-01 | 88.5% | 87.4% |
| 5079994 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.62 | 49.0 | 4.98e-01 | 91.7% | 87.4% |
| 4943278 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.61 | 48.0 | 4.86e-01 | 90.6% | 87.4% |
| 5034761 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.60 | 49.0 | 4.76e-01 | 91.7% | 81.0% |
| 3592492 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.60 | 48.0 | 4.50e-01 | 93.8% | 69.6% |
| 4102797 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.59 | 49.0 | 4.88e-01 | 91.7% | 86.0% |
| 5022355 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 40.0 | 3.55e-01 | 70.8% | 67.9% |
| 5049105 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.58 | 49.0 | 4.71e-01 | 96.9% | 85.2% |
| 5037322 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.57 | 49.0 | 4.73e-01 | 96.9% | 85.5% |
| 3625482 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 39.0 | 3.79e-01 | 71.9% | 96.2% |
| 3923792 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 46.0 | 3.39e-01 | 94.8% | 59.0% |
| 5014209 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.54 | 39.0 | 3.92e-01 | 76.0% | 100.0% |
| 3235144 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 46.0 | 3.33e-01 | 94.8% | 66.9% |
| 3610682 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 47.0 | 3.38e-01 | 100.0% | 61.0% |
| 3883221 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.54 | 45.0 | 3.31e-01 | 95.8% | 57.6% |
| 3742605 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 44.0 | 3.14e-01 | 95.8% | 56.1% |
| 3993006 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 3.23e-01 | 96.9% | 64.9% |
| 3354243 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.53 | 46.0 | 3.34e-01 | 100.0% | 60.3% |
| 4029397 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 45.0 | 3.21e-01 | 100.0% | 81.8% |
| 4026407 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 41.0 | 3.70e-01 | 83.3% | 88.5% |
| 1168094 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 36.0 | 3.74e-01 | 84.4% | 76.4% |
| 3652778 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 41.0 | 2.92e-01 | 90.6% | 49.9% |
| 3374173 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.51 | 45.0 | 3.23e-01 | 100.0% | 77.7% |
| 3366847 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 43.0 | 3.05e-01 | 95.8% | 44.2% |
| 4038066 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 41.0 | 3.88e-01 | 86.5% | 88.6% |
| 4012488 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.51 | 36.0 | 3.65e-01 | 74.0% | 100.0% |
| 3348724 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.50 | 41.0 | 3.98e-01 | 87.5% | 91.4% |
| 5036011 | 304.28.1.38 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C | 0.50 | 42.0 | 3.39e-01 | 92.7% | 92.6% |