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p47
Euk-VirMalacosoma_neustria_nucleopolyhedrovirus
p47__YP_009552157__Malacosoma_neustria_nucleopolyhedrovirus__38012
Identity
- Accession:
- YP_009552157 ↗
- Protein ID:
- p47
- Kingdom:
- euk
Quality
75.6
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Malacosoma_neustria_nucleopolyhedrovirus
TaxID: 38012
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-70
Domain cluster:
rep: transcription_regulator__YP_009316134__Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus__268591__D3-67
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05112.18 best | Baculo_p47 | 49.3 | 8.10e-13 | 94.0% | 19.3% |
CATH (91)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.74 | 52.0 | 4.94e-01 | 100.0% | 61.7% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.74 | 58.0 | 5.12e-01 | 97.0% | 59.6% |
| 2yx1A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 53.0 | 3.89e-01 | 97.0% | 28.9% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 53.0 | 4.84e-01 | 97.0% | 58.2% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.72 | 58.0 | 5.86e-01 | 100.0% | 88.2% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 55.0 | 5.00e-01 | 95.5% | 61.8% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 53.0 | 4.76e-01 | 100.0% | 56.8% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 53.0 | 5.01e-01 | 97.0% | 67.1% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.71 | 59.0 | 6.00e-01 | 100.0% | 95.5% |
| 2ca9A02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.71 | 53.0 | 4.85e-01 | 95.5% | 60.7% |
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 50.0 | 4.69e-01 | 97.0% | 60.0% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 52.0 | 4.92e-01 | 97.0% | 65.4% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 49.0 | 3.67e-01 | 98.5% | 29.7% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 51.0 | 4.81e-01 | 94.0% | 63.9% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 50.0 | 4.78e-01 | 97.0% | 66.7% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 53.0 | 4.86e-01 | 97.0% | 63.6% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 52.0 | 4.81e-01 | 95.5% | 64.3% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 52.0 | 4.77e-01 | 97.0% | 62.5% |
| 5heeA00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.68 | 58.0 | 3.89e-01 | 95.5% | 99.6% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.68 | 56.0 | 5.78e-01 | 100.0% | 98.4% |
| 5fiiB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 50.0 | 4.80e-01 | 98.5% | 67.9% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 50.0 | 4.57e-01 | 94.0% | 58.9% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.68 | 58.0 | 5.00e-01 | 100.0% | 60.2% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.67 | 52.0 | 4.80e-01 | 97.0% | 65.5% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 50.0 | 4.61e-01 | 100.0% | 61.1% |
| 1l2mA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.66 | 50.0 | 4.19e-01 | 97.0% | 47.5% |
| 2efjA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 53.0 | 3.69e-01 | 97.0% | 27.6% |
| 1w99A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.65 | 55.0 | 4.08e-01 | 95.5% | 100.0% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 51.0 | 4.52e-01 | 97.0% | 58.2% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 57.0 | 4.85e-01 | 100.0% | 73.1% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.64 | 54.0 | 4.69e-01 | 97.0% | 60.4% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.63 | 53.0 | 4.55e-01 | 97.0% | 61.9% |
| 3qw9B00 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.63 | 55.0 | 4.17e-01 | 100.0% | 46.4% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 53.0 | 4.49e-01 | 100.0% | 56.9% |
| 4e2aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 42.0 | 3.18e-01 | 97.0% | 27.1% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 47.0 | 4.24e-01 | 97.0% | 57.0% |
| 2wqlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 55.0 | 4.22e-01 | 100.0% | 80.3% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.62 | 55.0 | 4.14e-01 | 100.0% | 58.7% |
| 6pf8A01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.62 | 44.0 | 3.27e-01 | 95.5% | 29.0% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.62 | 51.0 | 4.66e-01 | 100.0% | 69.7% |
| 1jj2L00 | 3.40.1120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 | 0.61 | 53.0 | 3.87e-01 | 100.0% | 43.8% |
| 3mwbB03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 53.0 | 4.76e-01 | 97.0% | 92.6% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.61 | 53.0 | 4.41e-01 | 100.0% | 86.3% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 44.0 | 4.32e-01 | 95.5% | 70.3% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 46.0 | 4.06e-01 | 98.5% | 55.7% |
| 2h2qB01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.61 | 48.0 | 3.34e-01 | 98.5% | 26.9% |
| 4h4kA01 | 3.30.70.2940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.17e-01 | 95.5% | 62.9% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 50.0 | 4.31e-01 | 100.0% | 58.0% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.60 | 51.0 | 4.59e-01 | 100.0% | 68.8% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 45.0 | 4.09e-01 | 98.5% | 60.0% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.59 | 52.0 | 3.36e-01 | 98.5% | 38.1% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 46.0 | 4.08e-01 | 97.0% | 58.2% |
| 3uebF00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.59 | 50.0 | 4.49e-01 | 100.0% | 71.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.58 | 48.0 | 3.96e-01 | 98.5% | 47.8% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 48.0 | 4.43e-01 | 97.0% | 71.6% |
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 43.0 | 3.80e-01 | 95.5% | 54.0% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.29e-01 | 100.0% | 73.8% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 3.98e-01 | 97.0% | 57.4% |
| 4m3sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 40.0 | 3.08e-01 | 100.0% | 30.8% |
| 2jlmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 41.0 | 3.07e-01 | 100.0% | 28.8% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.57 | 49.0 | 3.12e-01 | 100.0% | 24.7% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.57 | 49.0 | 3.88e-01 | 100.0% | 55.4% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 44.0 | 3.96e-01 | 97.0% | 59.2% |
| 1blxA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 49.0 | 4.46e-01 | 97.0% | 70.7% |
| 2yqzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 3.16e-01 | 100.0% | 29.5% |
| 4b6uA00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.56 | 46.0 | 3.30e-01 | 94.0% | 30.0% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.56 | 46.0 | 3.92e-01 | 95.5% | 58.5% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.21e-01 | 100.0% | 65.0% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 47.0 | 3.78e-01 | 94.0% | 53.5% |
| 4ew7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 46.0 | 3.94e-01 | 95.5% | 85.0% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 3.83e-01 | 100.0% | 55.4% |
| 4kvxA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 38.0 | 2.97e-01 | 91.0% | 32.9% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 3.74e-01 | 97.0% | 58.4% |
| 1m6eX02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 2.85e-01 | 80.6% | 99.1% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 44.0 | 3.92e-01 | 97.0% | 71.2% |
| 5wpjA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.54 | 43.0 | 3.82e-01 | 94.0% | 65.7% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.54 | 45.0 | 3.94e-01 | 98.5% | 65.5% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 3.41e-01 | 97.0% | 38.7% |
| 3dmeA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.53 | 38.0 | 3.05e-01 | 79.1% | 52.9% |
| 3fvcA03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.53 | 43.0 | 3.81e-01 | 97.0% | 97.3% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 3.65e-01 | 98.5% | 60.6% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 3.84e-01 | 97.0% | 64.6% |
| 2cy2A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 36.0 | 2.82e-01 | 100.0% | 28.7% |
| 1tiqB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 36.0 | 2.79e-01 | 98.5% | 28.6% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 45.0 | 3.91e-01 | 100.0% | 62.6% |
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 38.0 | 3.19e-01 | 100.0% | 43.9% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.51 | 43.0 | 3.62e-01 | 100.0% | 56.2% |
| 2pziB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 38.0 | 3.09e-01 | 89.6% | 38.6% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.66e-01 | 91.0% | 65.9% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.52e-01 | 100.0% | 58.0% |
| 6w5yC01 | 3.90.310.10 | Alpha Beta › Alpha-Beta Complex › Viral Glycoprotein Gp70 › ENV polyprotein, receptor-binding domain | 0.50 | 42.0 | 3.40e-01 | 100.0% | 75.7% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3988189 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.78 | 57.0 | 5.38e-01 | 94.0% | 65.0% |
| 4666632 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.77 | 65.0 | 5.66e-01 | 100.0% | 62.0% |
| 4518565 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.76 | 58.0 | 5.16e-01 | 100.0% | 57.9% |
| 3817212 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.75 | 57.0 | 5.64e-01 | 98.5% | 77.1% |
| 4116290 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.75 | 56.0 | 4.84e-01 | 97.0% | 53.0% |
| 4299862 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.75 | 56.0 | 4.84e-01 | 97.0% | 53.0% |
| 4504111 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.74 | 56.0 | 5.24e-01 | 95.5% | 66.3% |
| 3642698 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.74 | 56.0 | 6.10e-01 | 97.0% | 98.2% |
| 3672469 | 304.55.1.18 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › ACT | 0.74 | 56.0 | 4.43e-01 | 97.0% | 39.7% |
| 3384789 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.74 | 57.0 | 4.82e-01 | 98.5% | 50.0% |
| 3970545 | 310.3.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM | 0.74 | 54.0 | 5.16e-01 | 95.5% | 65.8% |
| 4206173 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.74 | 56.0 | 5.06e-01 | 97.0% | 60.0% |
| 148700 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.74 | 58.0 | 5.12e-01 | 97.0% | 59.6% |
| 3425342 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.74 | 58.0 | 5.58e-01 | 98.5% | 74.7% |
| 4291007 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.74 | 55.0 | 4.83e-01 | 97.0% | 54.1% |
| 4417915 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.73 | 56.0 | 5.02e-01 | 98.5% | 60.0% |
| 3317802 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.73 | 58.0 | 5.14e-01 | 100.0% | 60.0% |
| 3357573 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.73 | 55.0 | 4.65e-01 | 97.0% | 49.1% |
| 4953681 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.73 | 54.0 | 5.13e-01 | 95.5% | 66.3% |
| 4292806 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.73 | 56.0 | 4.85e-01 | 100.0% | 53.3% |
| 4487427 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.73 | 56.0 | 4.54e-01 | 98.5% | 44.0% |
| 4229029 | 304.9.1.75 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF8436 | 0.73 | 61.0 | 5.82e-01 | 100.0% | 78.8% |
| 4946197 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.73 | 51.0 | 3.68e-01 | 97.0% | 26.5% |
| 3205089 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.73 | 62.0 | 6.29e-01 | 94.0% | 100.0% |
| 3164917 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.73 | 54.0 | 5.10e-01 | 95.5% | 66.3% |
| 4468514 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 55.0 | 5.23e-01 | 98.5% | 68.8% |
| 3840001 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.72 | 55.0 | 5.08e-01 | 98.5% | 63.5% |
| 3593007 | 331.10.1.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase | 0.72 | 54.0 | 3.48e-01 | 95.5% | 18.0% |
| 5052852 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.72 | 64.0 | 4.63e-01 | 98.5% | 46.7% |
| 5044954 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 55.0 | 5.21e-01 | 97.0% | 68.8% |
| 3639646 | 304.133.1.0 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein | 0.72 | 64.0 | 6.21e-01 | 100.0% | 92.0% |
| 4611510 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.72 | 53.0 | 4.74e-01 | 97.0% | 55.8% |
| 4346339 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.71 | 53.0 | 5.07e-01 | 97.0% | 67.5% |
| 4263573 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.71 | 54.0 | 5.21e-01 | 97.0% | 72.0% |
| 4401827 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.71 | 53.0 | 4.82e-01 | 97.0% | 58.9% |
| 3687652 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.71 | 63.0 | 6.30e-01 | 100.0% | 97.1% |
| 4074612 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.71 | 53.0 | 4.70e-01 | 97.0% | 55.8% |
| 4667438 | 304.8.1.53 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th | 0.71 | 56.0 | 4.24e-01 | 100.0% | 36.8% |
| 3492449 | 256.1.1.9 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › YbjQ_3 | 0.71 | 59.0 | 5.69e-01 | 100.0% | 82.7% |
| 3450309 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 58.0 | 5.14e-01 | 100.0% | 63.2% |
| 4300927 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 56.0 | 4.65e-01 | 97.0% | 49.6% |
| 3615945 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.70 | 59.0 | 5.32e-01 | 100.0% | 68.1% |
| 4596185 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.70 | 54.0 | 5.14e-01 | 100.0% | 71.8% |
| 3719272 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.70 | 59.0 | 5.88e-01 | 98.5% | 91.4% |
| 3989610 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 52.0 | 4.84e-01 | 97.0% | 64.3% |
| 4292698 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.69 | 61.0 | 5.11e-01 | 100.0% | 92.2% |
| 5011154 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.69 | 61.0 | 5.21e-01 | 97.0% | 61.9% |
| 4249240 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.68 | 50.0 | 4.45e-01 | 97.0% | 53.5% |
| 3522051 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 49.0 | 4.73e-01 | 92.5% | 66.7% |
| 3471665 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.67 | 51.0 | 5.07e-01 | 100.0% | 77.1% |
| 3605864 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.67 | 59.0 | 4.06e-01 | 100.0% | 31.3% |
| 3167746 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.66 | 57.0 | 4.38e-01 | 97.0% | 45.3% |
| 4173939 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.64 | 48.0 | 4.35e-01 | 97.0% | 58.9% |
| 4568696 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.64 | 55.0 | 4.58e-01 | 97.0% | 55.0% |
| 4965450 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.64 | 56.0 | 4.82e-01 | 100.0% | 70.9% |
| 4943262 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.64 | 54.0 | 3.63e-01 | 95.5% | 24.5% |
| 3236260 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 54.0 | 4.75e-01 | 98.5% | 64.0% |
| 4182228 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.63 | 55.0 | 5.15e-01 | 100.0% | 80.0% |
| 3575932 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.62 | 52.0 | 4.37e-01 | 100.0% | 53.3% |
| 4927424 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 56.0 | 4.44e-01 | 100.0% | 49.6% |
| 3402965 | 304.4.1.15 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP | 0.62 | 54.0 | 4.69e-01 | 98.5% | 63.0% |
| 3829359 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 52.0 | 4.80e-01 | 100.0% | 72.9% |
| 4003789 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.62 | 52.0 | 4.39e-01 | 100.0% | 54.2% |
| 3604506 | 2.1.1.95 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C | 0.62 | 48.0 | 3.91e-01 | 100.0% | 43.7% |
| 3706456 | 304.55.2.8 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons | 0.61 | 53.0 | 4.85e-01 | 97.0% | 72.2% |
| 3611756 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.61 | 54.0 | 3.90e-01 | 97.0% | 36.6% |
| 5053336 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 50.0 | 4.38e-01 | 98.5% | 60.0% |
| 3699932 | 2003.1.5.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT | 0.61 | 52.0 | 3.54e-01 | 97.0% | 26.3% |
| 5022225 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.60 | 51.0 | 3.79e-01 | 100.0% | 34.7% |
| 3711752 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 53.0 | 3.83e-01 | 97.0% | 35.6% |
| 3289874 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.60 | 48.0 | 3.83e-01 | 91.0% | 42.0% |
| 3512337 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.60 | 51.0 | 5.08e-01 | 98.5% | 97.1% |
| 3611407 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.60 | 53.0 | 4.33e-01 | 100.0% | 96.1% |
| 3241973 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 53.0 | 4.67e-01 | 100.0% | 86.0% |
| 3704046 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.59 | 50.0 | 4.47e-01 | 95.5% | 69.5% |
| 3945841 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.59 | 49.0 | 4.32e-01 | 97.0% | 63.8% |
| 5023975 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.58 | 48.0 | 4.02e-01 | 97.0% | 54.4% |
| 4959305 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 48.0 | 3.97e-01 | 97.0% | 51.2% |
| 3883221 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.56 | 49.0 | 3.26e-01 | 100.0% | 41.0% |
| 3609886 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.56 | 46.0 | 4.16e-01 | 97.0% | 74.0% |
| 4959304 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 48.0 | 3.97e-01 | 97.0% | 55.8% |
| 4025202 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 47.0 | 3.07e-01 | 98.5% | 38.8% |
| 3590830 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.55 | 46.0 | 4.18e-01 | 97.0% | 68.4% |
| 3674969 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 44.0 | 2.91e-01 | 100.0% | 36.2% |
| 3593459 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.53 | 45.0 | 2.94e-01 | 98.5% | 37.8% |
| 3178364 | 319.1.1.19 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 | 0.52 | 45.0 | 3.95e-01 | 100.0% | 87.6% |
| 3614396 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 43.0 | 2.78e-01 | 100.0% | 35.8% |
| 3182209 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.52 | 41.0 | 2.71e-01 | 97.0% | 20.1% |
| 3588477 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.52 | 43.0 | 3.76e-01 | 98.5% | 65.5% |
| 364035 | 304.124.1.1 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_U | 0.51 | 42.0 | 3.50e-01 | 98.5% | 54.1% |
D2
high
residues 80-146
Domain cluster:
rep: p47__YP_009505996__Clostera_anastomosis_granulovirus_B__1986290__D104-164
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05112.18 best | Baculo_p47 | 105.3 | 7.30e-30 | 100.0% | 21.9% |
D3
medium
residues 147-220_278-337
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05112.18 best | Baculo_p47 | 112.3 | 5.40e-32 | 55.2% | 23.2% |
| PF05112.18 | Baculo_p47 | 58.3 | 1.50e-15 | 32.8% | 13.4% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 29.0 | 3.86e-01 | 92.5% | 83.3% |
| 7jpxA02 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.56 | 38.0 | 3.96e-01 | 97.8% | 75.2% |
| 2np3A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 38.0 | 3.72e-01 | 70.1% | 69.0% |
| 7yugA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.54 | 39.0 | 4.18e-01 | 75.4% | 86.7% |
| 1q1vA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 29.0 | 3.64e-01 | 76.9% | 94.3% |
| 3vayA02 | 1.20.120.1600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 34.0 | 3.94e-01 | 94.8% | 95.4% |
| 3byiD00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.51 | 37.0 | 3.20e-01 | 74.6% | 72.7% |
| 2osaA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.51 | 36.0 | 3.25e-01 | 73.9% | 75.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278112 | 4953.1.1.25 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › DUF4226 | 0.56 | 39.0 | 4.28e-01 | 96.3% | 86.4% |
| 3775970 | 101.1.1.222 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Hrp3 | 0.54 | 34.0 | 3.61e-01 | 74.6% | 70.3% |
| 4097515 | 4198.1.1.1 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like › TerB | 0.54 | 37.0 | 3.82e-01 | 82.1% | 73.1% |
| 5043629 | 601.7.1.34 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129 | 0.50 | 24.0 | 2.99e-01 | 70.1% | 71.4% |
D4
medium
residues 221-277
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05112.18 best | Baculo_p47 | 56.2 | 6.60e-15 | 100.0% | 17.6% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sqgA03 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.79 | 61.0 | 6.10e-01 | 94.7% | 82.8% |
| 3ajdA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.77 | 61.0 | 6.04e-01 | 96.5% | 81.7% |
| 2yxlA03 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.77 | 59.0 | 5.95e-01 | 94.7% | 82.8% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.72 | 62.0 | 5.22e-01 | 100.0% | 60.6% |
| 1iugA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 54.0 | 4.51e-01 | 100.0% | 53.2% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.64 | 52.0 | 5.17e-01 | 98.2% | 89.8% |
| 4u9rA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 49.0 | 4.78e-01 | 94.7% | 78.5% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.63 | 48.0 | 4.59e-01 | 87.7% | 77.5% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 50.0 | 4.50e-01 | 100.0% | 63.5% |
| 6ztgA01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.58 | 47.0 | 4.42e-01 | 100.0% | 82.7% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.57 | 43.0 | 4.30e-01 | 84.2% | 87.9% |
| 3axsA02 | 3.30.56.70 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain | 0.56 | 38.0 | 3.73e-01 | 80.7% | 63.1% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.03e-01 | 77.2% | 33.3% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.02e-01 | 86.0% | 41.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4963959 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.69 | 58.0 | 5.14e-01 | 100.0% | 64.7% |
| 4943384 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.69 | 60.0 | 3.80e-01 | 100.0% | 51.2% |
| 3598887 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 58.0 | 5.37e-01 | 100.0% | 80.0% |
| 3967869 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.66 | 56.0 | 3.95e-01 | 100.0% | 39.5% |
| 4567824 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.65 | 56.0 | 3.93e-01 | 100.0% | 32.8% |
| 4975021 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.65 | 56.0 | 4.90e-01 | 100.0% | 77.3% |
| 4633568 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.65 | 51.0 | 4.24e-01 | 91.2% | 50.9% |
| 3798494 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.62 | 50.0 | 4.45e-01 | 96.5% | 68.9% |
| 3934643 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.62 | 44.0 | 3.80e-01 | 89.5% | 46.3% |
| 3468979 | 312.1.1.18 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › PF26217 | 0.62 | 51.0 | 3.77e-01 | 98.2% | 94.7% |
| 4984880 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.61 | 53.0 | 3.58e-01 | 100.0% | 25.7% |
| 3738367 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 49.0 | 4.78e-01 | 98.2% | 90.8% |
| 3581178 | 327.11.1.12 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › PF26955 | 0.60 | 47.0 | 4.52e-01 | 93.0% | 82.9% |
| 5063713 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 50.0 | 4.95e-01 | 100.0% | 95.0% |
| 4023749 | 3012.1.1.10 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › ISN1 | 0.59 | 48.0 | 4.18e-01 | 100.0% | 80.0% |
| 5052825 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 48.0 | 4.03e-01 | 100.0% | 53.3% |
| 4928456 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.56 | 43.0 | 4.23e-01 | 89.5% | 84.6% |
| 3684539 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.56 | 46.0 | 3.21e-01 | 100.0% | 33.0% |
| 3717172 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 47.0 | 2.62e-01 | 100.0% | 17.1% |
| 3964882 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 36.0 | 2.89e-01 | 77.2% | 66.7% |
| 3632182 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.52 | 34.0 | 3.07e-01 | 70.2% | 77.1% |