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p48
Euk-VirAgrotis_segetum_nucleopolyhedrovirus_B
p48__YP_009112627__Agrotis_segetum_nucleopolyhedrovirus_B__1580580
Identity
- Accession:
- YP_009112627 ↗
- Protein ID:
- p48
- Kingdom:
- euk
Quality
84.8
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Agrotis_segetum_nucleopolyhedrovirus_B
TaxID: 1580580
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-207
Domain cluster:
rep: hypothetical_protein__YP_667882__Neodiprion_abietis_NPV__204507__D58-231
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04878.20 best | Baculo_p48 | 313.1 | 3.70e-93 | 97.5% | 54.6% |
D2
medium
residues 211-318
Domain cluster:
rep: P45__YP_003517840__Lymantria_xylina_nucleopolyhedrovirus__166921__D212-357
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04878.20 best | Baculo_p48 | 144.7 | 5.60e-42 | 100.0% | 28.4% |
D3
medium
residues 323-374
Domain cluster:
rep: p48__YP_009513116__Agrotis_segetum_granulovirus__10464__D338-388
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04878.20 best | Baculo_p48 | 56.0 | 5.00e-15 | 100.0% | 13.9% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.66 | 55.0 | 4.66e-01 | 94.2% | 58.0% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.66 | 46.0 | 4.37e-01 | 75.0% | 61.9% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.65 | 48.0 | 4.58e-01 | 80.8% | 66.7% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 54.0 | 4.54e-01 | 92.3% | 84.1% |
| 3a98B01 | 6.10.10.90 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.61 | 42.0 | 3.73e-01 | 78.8% | 48.1% |
| 2oap101 | 3.30.450.380 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 47.0 | 3.18e-01 | 96.2% | 29.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3995509 | 3730.1.1.0 ↗ | alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain | 0.76 | 58.0 | 5.46e-01 | 82.7% | 71.4% |
| 4932248 | 5076.2.1.3 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF4013 | 0.67 | 56.0 | 3.70e-01 | 92.3% | 24.0% |
| 3192888 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.67 | 56.0 | 4.55e-01 | 92.3% | 63.2% |
| 3450050 | 7581.1.1.25 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA, ACP_syn_III_C | 0.65 | 51.0 | 3.01e-01 | 90.4% | 11.0% |
| 3810942 | 4030.1.1.10 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › PPR | 0.61 | 38.0 | 3.62e-01 | 73.1% | 50.8% |
| 5052725 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.58 | 46.0 | 4.33e-01 | 100.0% | 72.9% |