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p48

Euk-Vir

Norovirus_GIII

p48__YP_009237932__Norovirus_GIII__340017

Identity

Accession:: YP_009237932 ↗
Protein ID:: p48
Kingdom:: euk

Quality

58.8 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Caliciviridae› Norovirus› Norovirus_GIII

TaxID: 340017

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 249-323

PDB

D2 medium residues 108-248

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08405.16 best	Calici_PP_N	181.5	3.10e-53	94.3%	37.4%

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2lktA00	3.90.1720.10	Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme)	0.76	53.0	5.61e-01	70.9%	100.0%
2xk0A00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.62	29.0	3.97e-01	83.0%	88.4%
1nrkA03	2.40.30.160	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.61	29.0	3.18e-01	87.9%	53.3%
6bhdA03	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.61	27.0	3.90e-01	78.7%	93.7%
2eqjA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.60	26.0	3.75e-01	75.9%	86.4%
2qf4A02	2.40.10.350	Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2	0.57	31.0	3.86e-01	87.2%	83.5%
4zgnB00	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.53	33.0	3.78e-01	90.8%	82.5%
1hpgA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.51	31.0	3.59e-01	95.0%	83.8%
1h8eH00	2.60.15.10	Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal	0.51	27.0	3.27e-01	86.5%	78.7%
1a1rA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.51	29.0	3.70e-01	86.5%	95.3%
5dn6I00	2.60.15.10	Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal	0.50	27.0	3.35e-01	86.5%	90.7%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3527284	219.1.1.25 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT	0.81	56.0	5.63e-01	70.9%	83.4%
3917565	219.1.1.25 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT	0.81	60.0	5.93e-01	77.3%	96.7%
3932681	219.1.1.25 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT	0.80	56.0	5.84e-01	71.6%	90.8%
3485965	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.69	30.0	4.57e-01	74.5%	96.7%
3340900	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.62	30.0	4.32e-01	79.4%	100.0%
3359784	4.1.1.42 ↗	beta barrels › SH3 › SH3 › SH3 › Agenet	0.60	29.0	4.16e-01	79.4%	100.0%
4949489	1.1.8.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain	0.58	32.0	4.01e-01	90.8%	89.4%
3465976	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	28.0	3.97e-01	78.7%	100.0%
3356591	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	30.0	3.63e-01	79.4%	75.8%
3449268	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.56	32.0	4.07e-01	82.3%	94.1%
3795301	4.1.1.319 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9	0.56	26.0	3.38e-01	80.9%	77.5%
3911241	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.55	31.0	3.55e-01	78.7%	74.0%
3622139	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.54	29.0	3.49e-01	80.1%	80.0%
4928381	4.7.1.1 ↗	beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29	0.53	26.0	3.44e-01	78.7%	87.7%
3499855	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	28.0	3.77e-01	77.3%	100.0%
3688604	1.1.8.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain	0.51	33.0	3.78e-01	88.7%	87.6%
3909175	1.1.17.1 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin	0.50	35.0	2.83e-01	70.9%	88.1%
4532481	1.1.17.1 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin	0.50	35.0	2.79e-01	70.2%	86.9%