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p49
Euk-VirTrichoplusia_ni_granulovirus_LBIV-12
p49__YP_009506081__Trichoplusia_ni_granulovirus_LBIV-12__1916701
Identity
- Accession:
- YP_009506081 ↗
- Protein ID:
- p49
- Kingdom:
- euk
Quality
79.6
mean pLDDT
Taxonomy
TaxID: 1916701
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 61-208
Domain cluster:
rep: hypothetical_protein_NeseNPV_gp63__YP_025170__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D92-212
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04913.18 best | Baculo_Y142 | 174.2 | 5.60e-51 | 100.0% | 32.5% |
D2
high
residues 210-325
Domain cluster:
rep: hypothetical_protein_NeseNPV_gp63__YP_025170__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D213-326
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04913.18 best | Baculo_Y142 | 134.0 | 9.00e-39 | 100.0% | 25.7% |
D3
high
residues 336-449
Domain cluster:
rep: p49__YP_009552151__Malacosoma_neustria_nucleopolyhedrovirus__38012__D349-459
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04913.18 best | Baculo_Y142 | 124.7 | 6.00e-36 | 100.0% | 24.6% |
D4
medium
residues 1-60
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 43.0 | 3.75e-01 | 93.3% | 60.2% |
| 2jhnA03 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.51 | 34.0 | 3.49e-01 | 80.0% | 70.0% |