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p4c_precursor
Euk-VirPteropox_virus
p4c_precursor__YP_009268836__Pteropox_virus__1873698
Identity
- Accession:
- YP_009268836 ↗
- Protein ID:
- p4c_precursor
- Kingdom:
- euk
Quality
69.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Pteropopoxvirus›
Pteropox_virus
TaxID: 1873698
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-70_85-174
Domain cluster:
rep: MC130L__NP_044081__Molluscum_contagiosum_virus_subtype_1__10280__D3-150
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06086.19 best | Pox_A30L_A26L | 124.8 | 5.00e-36 | 86.6% | 61.1% |
D2
medium
residues 175-250
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06086.19 best | Pox_A30L_A26L | 61.7 | 1.10e-16 | 93.4% | 32.1% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.72 | 38.0 | 3.69e-01 | 96.1% | 45.3% |
| 3m4uB00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.68 | 51.0 | 3.43e-01 | 80.3% | 55.8% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.65 | 49.0 | 4.59e-01 | 81.6% | 85.6% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.61 | 47.0 | 4.73e-01 | 85.5% | 94.9% |
| 4agsA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 52.0 | 4.42e-01 | 100.0% | 73.3% |
| 2ra1A01 | 1.20.58.790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 47.0 | 4.36e-01 | 89.5% | 93.9% |
| 7zviA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 35.0 | 2.98e-01 | 100.0% | 36.9% |
| 2o36A01 | 1.20.1050.40 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Endopeptidase. Chain P; domain 1 | 0.57 | 49.0 | 4.19e-01 | 97.4% | 89.1% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 50.0 | 4.44e-01 | 100.0% | 90.2% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 47.0 | 4.01e-01 | 100.0% | 56.1% |
| 3op0A01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.56 | 39.0 | 3.19e-01 | 100.0% | 40.4% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 44.0 | 4.30e-01 | 88.2% | 89.7% |
| 2c61A00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 2.52e-01 | 94.7% | 13.5% |
| 3cwzB01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.55 | 48.0 | 3.93e-01 | 98.7% | 87.7% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.55 | 41.0 | 3.40e-01 | 84.2% | 91.5% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 43.0 | 3.95e-01 | 100.0% | 69.0% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 47.0 | 4.22e-01 | 98.7% | 99.0% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 44.0 | 3.70e-01 | 98.7% | 63.5% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.51 | 42.0 | 4.03e-01 | 100.0% | 77.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839204 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.72 | 55.0 | 4.12e-01 | 80.3% | 45.6% |
| 4029943 | 3755.3.1.357 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › RIFIN | 0.72 | 39.0 | 2.79e-01 | 96.1% | 20.0% |
| 4176201 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.66 | 51.0 | 4.74e-01 | 82.9% | 93.7% |
| 3476351 | 604.4.1.0 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP | 0.64 | 47.0 | 4.58e-01 | 78.9% | 95.3% |
| 4624818 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.63 | 50.0 | 4.77e-01 | 86.8% | 92.2% |
| 5021443 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.62 | 46.0 | 4.27e-01 | 80.3% | 84.0% |
| 3703561 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.62 | 37.0 | 3.83e-01 | 100.0% | 64.3% |
| 3768303 | 3736.1.1.1 ↗ | alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4_HD2 | 0.60 | 48.0 | 3.89e-01 | 93.4% | 62.4% |
| 5079853 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.56 | 44.0 | 3.69e-01 | 84.2% | 52.3% |
| 3945879 | 101.38.1.4 ↗ | alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep › PriCT_1 | 0.55 | 41.0 | 3.69e-01 | 80.3% | 65.5% |
| 3219325 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.55 | 45.0 | 3.80e-01 | 100.0% | 63.3% |
| 3824761 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.55 | 31.0 | 3.19e-01 | 93.4% | 57.1% |
| 5081313 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.55 | 39.0 | 3.72e-01 | 78.9% | 63.3% |
| 3994667 | 109.24.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_C | 0.54 | 47.0 | 3.93e-01 | 100.0% | 94.1% |
| 4918 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.52 | 43.0 | 3.90e-01 | 100.0% | 67.0% |
| 3183850 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.51 | 43.0 | 3.03e-01 | 100.0% | 46.0% |
| 5017845 | 632.7.1.67 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › YetF_N | 0.51 | 40.0 | 3.93e-01 | 85.5% | 87.1% |
D3
medium
residues 251-335_367-386
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jzjC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 29.0 | 3.50e-01 | 71.4% | 68.6% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.60 | 34.0 | 3.33e-01 | 77.1% | 51.8% |
| 1g6eA00 | 2.60.20.30 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.59 | 43.0 | 4.65e-01 | 82.9% | 93.1% |
| 1iw4A00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.54 | 24.0 | 3.10e-01 | 72.4% | 72.7% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.54 | 37.0 | 3.98e-01 | 71.4% | 100.0% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.52 | 36.0 | 3.81e-01 | 72.4% | 96.8% |
| 5lvxC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 28.0 | 2.79e-01 | 71.4% | 50.0% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 42.0 | 3.49e-01 | 92.4% | 77.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2526309 | 7083.1.1.1 ↗ | beta sandwiches › C-terminal domain of viral protein A26 › C-terminal domain of viral protein A26 › C-terminal domain of viral protein A26 › PF31251 | 0.86 | 80.0 | 7.13e-01 | 97.1% | 90.7% |
| 3775701 | 72.1.1.1 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Crystall | 0.65 | 45.0 | 5.00e-01 | 75.2% | 89.4% |
| 4027310 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.60 | 34.0 | 3.16e-01 | 72.4% | 43.8% |
| 3628840 | 12.1.1.29 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_30C | 0.53 | 30.0 | 2.95e-01 | 80.0% | 48.3% |
D4
medium
residues 336-366_387-410
D5
medium
residues 547-644