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p5_protein

Euk-Vir

Emaravirus_toordali

p5_protein__YP_009268861__Emaravirus_toordali__1980430

Identity

Accession:
YP_009268861 ↗
Protein ID:
p5_protein
Kingdom:
euk

Quality

65.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-155
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6n9aB02 3.30.420.200 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.58 32.0 4.10e-01 90.4% 97.1%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 36.0 3.99e-01 96.0% 90.0%
3kzwA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.53 34.0 3.20e-01 95.2% 50.6%
1okjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 33.0 3.63e-01 96.0% 82.1%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 32.0 3.30e-01 94.4% 66.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4463884 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.52 32.0 3.34e-01 92.0% 65.2%
4185827 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 28.0 3.00e-01 72.8% 57.3%
3384326 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.50 28.0 3.36e-01 76.0% 83.7%
3704966 2484.1.1.49 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.50 33.0 3.88e-01 70.4% 94.4%
D2 high residues 207-294
PDB
D3 medium residues 313-330_384-444
PDB
D4 medium residues 331-383_445-473
PDB