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p64
Euk-VirCarnation_yellow_fleck_virus
p64__YP_008858534__Carnation_yellow_fleck_virus__940280
Identity
- Accession:
- YP_008858534 ↗
- Protein ID:
- p64
- Kingdom:
- euk
Quality
74.4
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Carnation_yellow_fleck_virus
TaxID: 940280
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 186-310
Domain cluster:
rep: HSP90__YP_009553249__Blackcurrant_leafroll-associated_virus_1__2292426__D184-302
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03225.20 best | Viral_Hsp90 | 91.6 | 6.10e-26 | 100.0% | 23.1% |
D2
high
residues 331-495
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03225.20 best | Viral_Hsp90 | 154.5 | 5.20e-45 | 99.4% | 30.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mabA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 24.0 | 3.18e-01 | 89.1% | 78.8% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 28.0 | 3.30e-01 | 87.3% | 76.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4291115 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.68 | 23.0 | 3.39e-01 | 73.9% | 65.0% |
| 3703366 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 26.0 | 2.28e-01 | 85.5% | 29.8% |
| 3641595 | 2002.1.1.67 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pro_dh | 0.51 | 44.0 | 3.26e-01 | 94.5% | 59.3% |
| 4954357 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.50 | 40.0 | 3.25e-01 | 85.5% | 97.0% |
D3
medium
residues 15-107
Domain cluster:
rep: p54__YP_003075969__Carrot_yellow_leaf_virus__656190__D13-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03225.20 best | Viral_Hsp90 | 42.1 | 6.30e-11 | 100.0% | 20.7% |
D4
medium
residues 122-168
Domain cluster:
rep: CPh__YP_009162625__Tobacco_virus_1__1692045__D140-183
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03225.20 best | Viral_Hsp90 | 41.2 | 1.10e-10 | 100.0% | 8.4% |