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p6
Euk-VirCucurbit_yellow_stunting_disorder_virus
p6__NP_851573__Cucurbit_yellow_stunting_disorder_virus__51330
Identity
- Accession:
- NP_851573 ↗
- Protein ID:
- p6
- Kingdom:
- euk
Quality
76.1
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Crinivirus›
Cucurbit_yellow_stunting_disorder_virus
TaxID: 51330
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-51
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37A03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.58 | 45.0 | 4.30e-01 | 89.8% | 78.3% |
| 3r5xA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 3.90e-01 | 100.0% | 94.1% |
| 2v25A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 39.0 | 3.25e-01 | 83.7% | 92.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 223697 | 3071.1.1.5 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Gp44-like_3rd | 0.58 | 45.0 | 4.33e-01 | 89.8% | 79.7% |
| 3705562 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.53 | 43.0 | 2.48e-01 | 100.0% | 13.7% |
| 3944580 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.53 | 39.0 | 2.90e-01 | 81.6% | 78.6% |
| 3628663 | 2498.5.1.1 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 | 0.51 | 35.0 | 2.13e-01 | 81.6% | 9.7% |
| 3574082 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.50 | 37.0 | 3.17e-01 | 83.7% | 84.4% |