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p74

Euk-Vir

Agrotis_segetum_nucleopolyhedrovirus_B

p74__YP_009112702__Agrotis_segetum_nucleopolyhedrovirus_B__1580580

Identity

Accession:
YP_009112702 ↗
Protein ID:
p74
Kingdom:
euk

Quality

73.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Agrotis_segetum_nucleopolyhedrovirus_B

TaxID: 1580580

Cluster

View cluster (47 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-67_264-339
PDB
Domain cluster: rep: P74__YP_009249898__Mocis_latipes_granulovirus__2072024__D6-67_276-331
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08404.16 best Baculo_p74_N 72.0 6.80e-20 44.8% 21.0%
D2 medium residues 68-133
PDB
Domain cluster: rep: P74__YP_008378373__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D69-138
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08404.16 best Baculo_p74_N 99.2 3.60e-28 100.0% 21.7%
D3 medium residues 134-263_477-496
PDB
Domain cluster: rep: ACH96256.1_p74_protein-like_protein__YP_009345930__Kallithea_virus__1654582__D146-252_539-549
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08404.16 best Baculo_p74_N 198.4 2.10e-58 93.3% 43.0%
D4 medium residues 340-476_497-539
PDB
D5 medium residues 579-631
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.91 71.0 6.93e-01 83.0% 86.2%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.87 69.0 6.57e-01 84.9% 100.0%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.85 61.0 4.34e-01 75.5% 42.4%
2qf9A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.83 67.0 4.68e-01 86.8% 35.3%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.83 68.0 5.36e-01 88.7% 100.0%
2cazC00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.82 62.0 5.80e-01 81.1% 78.1%
5ffdA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.81 66.0 4.81e-01 88.7% 40.9%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.81 70.0 5.78e-01 94.3% 80.0%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 68.0 4.34e-01 92.5% 66.9%
3m6jA01 1.20.1260.40 Mainly Alpha › Up-down Bundle › Ferritin › 0.79 63.0 4.89e-01 88.7% 41.0%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.79 64.0 5.74e-01 90.6% 66.2%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.79 67.0 5.71e-01 94.3% 75.3%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.78 70.0 5.21e-01 100.0% 66.2%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.78 68.0 4.92e-01 98.1% 60.0%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.77 61.0 4.36e-01 86.8% 35.3%
3u3iA02 1.20.58.1110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 65.0 5.24e-01 100.0% 55.6%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 65.0 5.87e-01 100.0% 80.0%
1ezvC00 1.20.810.10 Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C 0.75 66.0 3.94e-01 100.0% 14.8%
1wtyA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.74 61.0 4.68e-01 90.6% 45.7%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.72 59.0 4.69e-01 94.3% 43.6%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 60.0 5.19e-01 100.0% 97.8%
2imsA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.71 55.0 3.85e-01 83.0% 30.1%
3kwoA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.70 58.0 4.32e-01 100.0% 34.2%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 59.0 4.97e-01 100.0% 57.3%
3zgxA02 6.10.140.1720 Special › Helix non-globular › Helix Hairpins › 0.70 59.0 5.07e-01 100.0% 78.0%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 58.0 5.53e-01 100.0% 85.1%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 50.0 4.27e-01 75.5% 73.9%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.70 58.0 5.40e-01 94.3% 76.1%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.69 56.0 4.70e-01 100.0% 50.0%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.69 57.0 5.29e-01 100.0% 98.6%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 56.0 5.24e-01 100.0% 85.9%
7vkcA01 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.68 48.0 3.43e-01 75.5% 24.8%
1m56C01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 57.0 5.36e-01 100.0% 76.8%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.67 48.0 4.11e-01 83.0% 45.1%
2ahmG01 6.10.250.2820 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 54.0 4.54e-01 94.3% 50.5%
1l7vA00 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.67 57.0 3.56e-01 100.0% 20.1%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 54.0 4.94e-01 94.3% 71.2%
6ne6A01 1.10.400.10 Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like 0.67 49.0 3.84e-01 79.2% 42.1%
3bvoA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.67 53.0 4.63e-01 92.5% 55.8%
2pybA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 54.0 4.05e-01 98.1% 74.2%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 58.0 4.69e-01 100.0% 82.5%
3gr3A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.66 50.0 3.30e-01 83.0% 61.1%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.66 51.0 4.46e-01 94.3% 55.3%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.66 52.0 3.97e-01 94.3% 37.6%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.65 50.0 3.78e-01 92.5% 70.7%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 53.0 4.83e-01 100.0% 71.4%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.64 51.0 4.90e-01 100.0% 79.4%
3besR03 6.10.140.1480 Special › Helix non-globular › Helix Hairpins › 0.63 49.0 4.90e-01 88.7% 87.5%
4fzwA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.63 48.0 4.75e-01 84.9% 77.6%
2r6fA02 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.62 45.0 3.30e-01 79.2% 27.1%
2d5wA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 50.0 3.31e-01 90.6% 24.5%
2qksA01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 51.0 4.11e-01 92.5% 89.6%
3spcA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 51.0 4.01e-01 100.0% 78.0%
4nooB00 1.10.8.1160 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.60 51.0 4.29e-01 100.0% 55.8%
4jfcA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.60 46.0 4.54e-01 86.8% 87.5%
1ecaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 40.0 3.04e-01 84.9% 32.4%
3mgdB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 37.0 2.74e-01 75.5% 46.1%
2kxpA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.51 37.0 3.14e-01 81.1% 65.4%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3482224 192.10.1.0 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.90 69.0 6.37e-01 81.1% 66.2%
3222544 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.88 72.0 5.22e-01 86.8% 37.7%
3970470 605.1.1.174 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HAMP 0.87 75.0 5.74e-01 94.3% 43.5%
5072045 604.10.1.0 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.84 68.0 5.35e-01 94.3% 43.8%
3600869 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.84 73.0 5.64e-01 100.0% 44.3%
3390898 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.84 70.0 5.53e-01 88.7% 50.0%
4028809 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.83 72.0 5.31e-01 94.3% 91.5%
4106131 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.83 71.0 5.62e-01 94.3% 51.4%
4012407 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.82 68.0 6.53e-01 100.0% 80.0%
4942548 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 69.0 4.93e-01 92.5% 32.7%
3271912 5033.1.1.0 ↗ extended segments › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM 0.82 72.0 5.80e-01 94.3% 55.8%
3800481 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.81 71.0 5.01e-01 94.3% 35.3%
4449117 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.81 68.0 5.94e-01 94.3% 63.7%
4261674 4246.1.1.2 ↗ a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 0.80 73.0 4.41e-01 100.0% 18.8%
3619435 192.8.1.36 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain 0.79 69.0 5.57e-01 94.3% 55.8%
3213478 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.79 66.0 5.61e-01 94.3% 57.6%
4946275 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.79 69.0 4.40e-01 100.0% 77.7%
3877310 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.78 68.0 3.85e-01 96.2% 10.0%
3575794 632.8.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.78 66.0 4.94e-01 92.5% 50.4%
3968965 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.78 68.0 5.66e-01 96.2% 63.3%
3927737 632.8.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.78 62.0 5.07e-01 86.8% 51.6%
3402853 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.77 59.0 6.09e-01 86.8% 94.0%
4038742 150.5.1.53 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE 0.77 66.0 5.44e-01 96.2% 74.7%
3277923 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.77 60.0 5.26e-01 88.7% 79.5%
3948731 192.10.1.1 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › DksA_N 0.76 67.0 5.19e-01 100.0% 53.3%
4954233 2004.1.1.49 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.76 63.0 4.48e-01 94.3% 31.5%
5066732 3646.1.1.1 ↗ alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.75 60.0 3.88e-01 88.7% 21.7%
3234964 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.75 63.0 4.97e-01 94.3% 47.3%
3416168 4177.1.1.4 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD 0.75 63.0 4.13e-01 94.3% 23.6%
5057042 605.1.1.355 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › RDD 0.75 65.0 4.90e-01 100.0% 84.4%
5007978 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.75 62.0 4.65e-01 94.3% 38.5%
4958436 2008.1.1.217 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UvrD-helicase 0.74 63.0 3.39e-01 94.3% 4.9%
4962781 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.73 61.0 5.53e-01 96.2% 70.7%
4079243 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.72 61.0 4.59e-01 94.3% 38.5%
3485269 192.6.1.3 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATPD_C_metazoa 0.72 55.0 5.80e-01 86.8% 100.0%
3197460 6132.1.1.7 ↗ alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › efThoc1 0.71 55.0 5.50e-01 88.7% 83.6%
3626992 632.8.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C 0.71 59.0 4.76e-01 94.3% 49.5%
3694629 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.71 57.0 5.10e-01 94.3% 65.0%
3412881 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.70 57.0 5.07e-01 94.3% 62.5%
5039649 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 58.0 4.62e-01 100.0% 45.8%
5013534 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.70 56.0 4.13e-01 94.3% 32.9%
3973158 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.70 56.0 5.03e-01 94.3% 65.0%
3240455 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 57.0 4.91e-01 96.2% 56.7%
4613072 101.1.2.721 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27113 0.68 58.0 4.18e-01 100.0% 35.2%
3218755 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.67 56.0 4.22e-01 100.0% 42.1%
4275057 1075.5.1.12 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ, Polysacc_synt_3 0.66 59.0 3.71e-01 100.0% 20.4%
3659411 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.66 54.0 4.45e-01 100.0% 48.2%
1068646 3711.1.1.2 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF3826 0.66 52.0 3.61e-01 94.3% 24.5%
3879791 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.63 50.0 3.44e-01 96.2% 22.7%
3909706 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 51.0 4.55e-01 100.0% 80.0%
3963152 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.62 49.0 3.14e-01 100.0% 17.7%
4075707 3711.1.1.0 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.61 50.0 4.33e-01 100.0% 71.6%