p86

Euk-Vir

Angelonia_flower_break_virus

p86__YP_459960__Angelonia_flower_break_virus__352882

Identity

81.3 mean pLDDT

Orthornavirae› Kitrinoviricota› Tolucaviricetes› Tolivirales› Tombusviridae› Alphacarmovirus› Angelonia_flower_break_virus

TaxID: 352882

View cluster (58 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 620-748

PDB

Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	96.3	2.60e-27	98.5%	25.9%

D2 medium residues 248-329_393-409

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337417__Changjiang_tombus-like_virus_9__1922823__D348-350_352-432_502-513

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	43.7	2.30e-11	64.6%	11.9%

D3 medium residues 330-349_483-537

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337657__Changjiang_tombus-like_virus_11__1922804__D27-99

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	70.1	2.30e-19	98.7%	11.3%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2r7rA05	1.10.357.80	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 ›	0.69	60.0	4.65e-01	100.0%	92.0%
1zcdA00	1.20.1530.10	Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain	0.56	39.0	2.54e-01	73.3%	73.9%
2wpvE00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.54	38.0	2.64e-01	74.7%	72.1%
3f1yA00	3.90.550.10	Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	0.52	42.0	2.88e-01	92.0%	65.4%
5tvfD00	3.60.90.10	Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase	0.51	35.0	2.40e-01	72.0%	46.7%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3937747	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.54	37.0	2.53e-01	73.3%	89.7%
5071263	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	31.0	2.97e-01	90.7%	47.8%
5069526	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.52	31.0	3.03e-01	100.0%	50.6%
5022886	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.52	41.0	2.67e-01	93.3%	77.1%
4966410	3281.1.1.0 ↗	alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related	0.52	44.0	2.67e-01	98.7%	52.9%
3648156	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.51	36.0	2.49e-01	76.0%	44.2%
4955870	633.23.1.0 ↗	alpha bundles › Bromodomain-like › Claudin › Claudin	0.50	41.0	3.16e-01	92.0%	73.3%
5055279	1075.1.2.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain	0.50	35.0	2.69e-01	76.0%	91.7%

D4 medium residues 350-392_410-427

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009333161__Hubei_tombus-like_virus_32__1923280__D105-190

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	47.8	1.30e-12	100.0%	15.6%

D5 medium residues 428-482_538-619

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	113.2	1.90e-32	60.6%	17.5%
PF00998.29	RdRP_3	83.8	1.60e-23	40.9%	11.3%