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p87

Euk-Vir

Agrotis_segetum_nucleopolyhedrovirus_B

p87__YP_009112626__Agrotis_segetum_nucleopolyhedrovirus_B__1580580

Identity

Accession:
YP_009112626 ↗
Protein ID:
p87
Kingdom:
euk

Quality

70.8 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Agrotis_segetum_nucleopolyhedrovirus_B

TaxID: 1580580

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-65
PDB
Domain cluster: rep: vp80__YP_009049914__Peridroma_alphabaculovirus__1346829__D3-70
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.84 64.0 5.44e-01 81.2% 53.0%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.79 63.0 5.97e-01 84.4% 73.0%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.78 69.0 6.36e-01 96.9% 81.5%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.78 59.0 5.09e-01 79.7% 90.6%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.77 69.0 6.34e-01 100.0% 89.2%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 58.0 5.56e-01 81.2% 79.5%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.76 60.0 5.91e-01 85.9% 79.4%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.76 60.0 5.40e-01 84.4% 97.6%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.76 57.0 5.38e-01 81.2% 91.0%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.76 58.0 4.94e-01 81.2% 56.6%
3a7mA01 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.76 54.0 4.48e-01 75.0% 45.5%
2y44A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.75 63.0 4.61e-01 98.4% 87.5%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.74 56.0 5.20e-01 81.2% 82.5%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.73 57.0 5.19e-01 84.4% 64.6%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.73 63.0 5.78e-01 100.0% 89.7%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.73 57.0 5.43e-01 85.9% 73.0%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.72 52.0 5.44e-01 78.1% 89.8%
1kfdA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.70 52.0 5.07e-01 79.7% 71.8%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.70 57.0 5.47e-01 93.8% 86.5%
6umqA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.69 60.0 4.96e-01 96.9% 97.4%
1dowA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.69 59.0 4.22e-01 100.0% 42.9%
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.68 59.0 4.44e-01 100.0% 80.7%
2bl2A00 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.66 53.0 4.09e-01 92.2% 57.7%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 50.0 4.82e-01 82.8% 79.7%
3sqiA01 1.10.150.540 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.66 43.0 3.78e-01 71.9% 43.4%
2gscC00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.66 57.0 4.78e-01 98.4% 67.3%
1jalA03 1.10.150.300 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain 0.64 55.0 5.16e-01 100.0% 88.9%
5z7cA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.61 50.0 3.68e-01 90.6% 34.1%
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.61 48.0 4.25e-01 89.1% 86.7%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.55 43.0 3.87e-01 85.9% 62.8%
2vixA03 1.20.1280.240 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.54 46.0 3.74e-01 90.6% 85.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5067835 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.87 75.0 7.31e-01 93.8% 90.0%
5004081 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.86 78.0 4.86e-01 100.0% 24.1%
5059135 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.85 77.0 7.47e-01 98.4% 90.0%
4494025 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.83 76.0 6.37e-01 100.0% 82.9%
4026417 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.81 62.0 5.86e-01 81.2% 73.3%
4682355 632.22.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.80 73.0 6.61e-01 100.0% 94.1%
4051415 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.78 53.0 4.87e-01 71.9% 98.8%
2674763 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.78 61.0 5.82e-01 84.4% 72.0%
4365052 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.78 61.0 5.32e-01 84.4% 88.4%
4109908 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.77 61.0 5.52e-01 84.4% 64.7%
3597506 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.77 58.0 5.54e-01 81.2% 73.3%
4237524 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.76 60.0 5.31e-01 84.4% 61.1%
4630202 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.76 60.0 5.32e-01 84.4% 61.8%
5041920 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.76 67.0 6.03e-01 100.0% 88.9%
4107823 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.76 59.0 5.09e-01 84.4% 55.0%
4180835 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.75 59.0 5.76e-01 84.4% 78.6%
3988424 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.75 58.0 5.86e-01 84.4% 83.1%
3678718 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.74 65.0 5.55e-01 100.0% 95.2%
3406711 632.11.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N 0.73 63.0 5.75e-01 96.9% 87.1%
4883675 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.73 59.0 5.67e-01 85.9% 77.5%
4683346 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.72 56.0 5.27e-01 84.4% 69.6%
1147932 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.72 56.0 5.08e-01 84.4% 62.4%
3746892 601.1.2.1 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Vinculin 0.71 61.0 4.87e-01 100.0% 63.0%
3725890 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.70 61.0 4.98e-01 100.0% 85.6%
2795737 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.67 52.0 5.05e-01 85.9% 79.5%
5027990 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.65 48.0 4.55e-01 81.2% 84.6%
3610129 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.62 52.0 4.03e-01 100.0% 78.1%
D2 high residues 393-577
PDB
Domain cluster: rep: VP80_capsid,_VP87__YP_009666405__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D664-831
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07267.18 best Nucleo_P87 127.2 1.30e-36 100.0% 28.4%
D3 medium residues 145-223
PDB
Domain cluster: rep: vp80__YP_009011137__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219__D138-214
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qsbA00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.80 68.0 6.70e-01 93.7% 95.3%
2k19A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.72 62.0 5.84e-01 97.5% 89.8%
2vl7A02 1.10.275.30 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › 0.71 59.0 5.32e-01 91.1% 90.0%
1qydA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 44.0 3.28e-01 72.2% 28.3%
2lmgA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.65 47.0 4.81e-01 75.9% 100.0%
3llkA01 1.20.120.1960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain 0.63 49.0 4.60e-01 100.0% 67.3%
3pvuA02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.63 43.0 4.29e-01 100.0% 70.0%
1ywmA02 1.20.1270.150 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Surface Active Protein 0.60 42.0 4.25e-01 73.4% 89.5%
2qi2A03 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.57 35.0 3.37e-01 70.9% 51.1%
3bh1A01 3.10.630.10 Alpha Beta › Roll › dip2346 fold like › dip2346 domain like 0.55 42.0 3.04e-01 84.8% 27.2%
6ig5A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.55 42.0 3.59e-01 83.5% 62.3%
3proC02 3.30.300.50 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.55 42.0 4.39e-01 100.0% 95.7%
1fc6A01 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.54 41.0 3.90e-01 84.8% 98.0%
2zt5A02 3.30.40.230 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.52 43.0 4.29e-01 92.4% 89.3%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.52 41.0 3.65e-01 87.3% 95.0%
6hrdA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 45.0 3.42e-01 100.0% 82.7%
3triA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 43.0 3.47e-01 100.0% 82.2%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4189563 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.79 67.0 6.45e-01 92.4% 92.1%
4945865 633.12.1.0 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like 0.79 68.0 6.53e-01 93.7% 91.0%
5001354 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.79 67.0 6.50e-01 93.7% 89.9%
4281149 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.78 67.0 6.33e-01 93.7% 85.3%
4956583 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.78 67.0 6.30e-01 93.7% 85.1%
5028850 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.78 66.0 6.56e-01 93.7% 96.4%
4267135 633.2.1.0 ↗ alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein 0.78 66.0 6.47e-01 92.4% 89.4%
5055634 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.77 65.0 6.48e-01 92.4% 100.0%
5053481 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.76 65.0 6.38e-01 93.7% 92.9%
4049578 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.76 65.0 6.28e-01 93.7% 92.0%
4942190 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.76 64.0 6.17e-01 92.4% 90.9%
3651030 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.76 65.0 4.98e-01 93.7% 60.6%
4937394 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.76 62.0 6.25e-01 91.1% 98.8%
5068709 633.12.1.0 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like 0.75 64.0 6.15e-01 93.7% 89.9%
4928468 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.75 63.0 6.08e-01 92.4% 89.9%
4932900 633.12.1.1 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 0.75 63.0 6.00e-01 93.7% 88.2%
3810674 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.74 63.0 5.56e-01 93.7% 95.7%
3589212 633.2.1.1 ↗ alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein › EntA_Immun 0.74 63.0 6.43e-01 92.4% 100.0%
3587205 633.2.1.1 ↗ alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein › EntA_Immun 0.74 62.0 5.96e-01 92.4% 85.6%
5065130 633.12.1.0 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like 0.73 62.0 6.11e-01 93.7% 96.5%
3674449 2003.1.2.164 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NmrA 0.70 46.0 4.52e-01 72.2% 62.4%
3398320 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.70 51.0 5.39e-01 98.7% 85.7%
3314513 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.70 60.0 4.69e-01 93.7% 57.7%
3806117 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.69 59.0 4.73e-01 93.7% 60.6%
3316910 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.69 58.0 4.65e-01 92.4% 58.1%
3298712 611.7.1.13 ↗ alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB10_N 0.69 57.0 4.84e-01 94.9% 75.0%
4085902 611.7.1.13 ↗ alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB10_N 0.68 57.0 4.67e-01 94.9% 68.4%
3430243 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.68 49.0 4.95e-01 77.2% 81.2%
3981128 150.1.2.8 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › MiaE 0.68 56.0 3.94e-01 92.4% 32.3%
3477305 130.1.2.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › ribosome-binding domain of Mdm38 › LETM1_RBD 0.66 58.0 4.36e-01 94.9% 88.6%
3855331 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 4.94e-01 83.5% 100.0%
3438235 509.1.1.1 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH 0.60 47.0 4.96e-01 91.1% 98.6%
4498861 109.27.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK 0.57 40.0 3.95e-01 74.7% 77.6%
4976070 327.7.1.17 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › EFG_C 0.55 38.0 4.11e-01 94.9% 96.7%
1099785 3694.1.1.0 ↗ alpha bundles › Tail specific protease helical domain › Tail specific protease helical domain › Tail specific protease helical domain 0.54 42.0 4.20e-01 86.1% 83.7%
3588546 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.53 40.0 4.11e-01 87.3% 88.0%
D4 medium residues 227-299
PDB
Domain cluster: rep: P87__YP_009117008__Pseudoplusia_includens_SNPV_IE__1592335__D191-261