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p94

Euk-Vir

Agrotis_segetum_nucleopolyhedrovirus_B

p94__YP_009112664__Agrotis_segetum_nucleopolyhedrovirus_B__1580580

Identity

Accession:
YP_009112664 ↗
Protein ID:
p94
Kingdom:
euk

Quality

75.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Agrotis_segetum_nucleopolyhedrovirus_B

TaxID: 1580580

Cluster

View cluster (6 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-226
PDB
Domain cluster: rep: p94__YP_009506089__Trichoplusia_ni_granulovirus_LBIV-12__1916701__D3-171
D2 high residues 399-531
PDB
Domain cluster: rep: P94__YP_010086516__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D221-348
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w53A00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.64 38.0 4.58e-01 80.5% 91.7%
4rg6A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 30.0 3.77e-01 89.5% 93.5%
2w7yA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 42.0 3.72e-01 88.0% 68.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3611311 109.4.1.765 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vac14_Fab1_bd 0.51 36.0 3.43e-01 97.7% 59.4%
D3 high residues 689-862
PDB
Domain cluster: rep: p94__YP_009011181__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219__D659-830
D4 medium residues 227-288_317-349
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3uo2B02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.76 58.0 6.13e-01 82.1% 90.5%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.73 57.0 5.91e-01 85.3% 89.8%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 54.0 5.94e-01 92.6% 100.0%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.72 57.0 5.45e-01 85.3% 89.1%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 58.0 5.72e-01 86.3% 92.2%
3vadA01 1.20.140.20 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain 0.71 57.0 4.81e-01 85.3% 97.4%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.70 49.0 4.17e-01 71.6% 65.3%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.70 56.0 5.35e-01 86.3% 91.0%
5j1gA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 60.0 4.50e-01 93.7% 81.1%
3vkgB03 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.69 62.0 5.24e-01 98.9% 86.5%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.69 59.0 5.54e-01 93.7% 90.6%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.67 48.0 5.29e-01 86.3% 94.7%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.66 55.0 4.64e-01 92.6% 64.5%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 46.0 5.05e-01 86.3% 94.7%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.64 53.0 4.42e-01 92.6% 67.0%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.64 53.0 5.11e-01 90.5% 78.2%
1wrdA00 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 50.0 5.04e-01 87.4% 88.8%
1chuA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.63 50.0 5.22e-01 88.4% 95.5%
3sbtB02 1.25.40.550 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Aar2, C-terminal domain-like 0.63 48.0 4.08e-01 91.6% 49.7%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 46.0 4.95e-01 92.6% 98.7%
1zbpA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 38.0 4.01e-01 92.6% 68.2%
5mlc900 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.62 49.0 4.75e-01 87.4% 94.4%
1n4kA02 1.25.10.30 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain 0.61 52.0 4.47e-01 92.6% 68.9%
4p3gD00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.59 52.0 4.19e-01 100.0% 81.0%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.58 46.0 4.27e-01 92.6% 66.4%
3uj9A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 46.0 3.42e-01 86.3% 90.7%
2imiB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 45.0 4.08e-01 88.4% 84.3%
7tj9A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.57 47.0 4.61e-01 92.6% 89.6%
3evyA00 1.20.58.910 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 41.0 4.40e-01 89.5% 86.7%
1dk8A02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.56 41.0 4.34e-01 90.5% 87.1%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.56 43.0 4.02e-01 87.4% 64.5%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 44.0 4.01e-01 89.5% 84.8%
1urvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 45.0 3.96e-01 93.7% 58.4%
5xdcB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.54 47.0 4.54e-01 98.9% 91.9%
6k41R00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 46.0 3.52e-01 98.9% 56.4%
3d3yA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.53 42.0 3.37e-01 84.2% 74.2%
1oj6A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 43.0 3.78e-01 91.6% 58.5%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 43.0 3.86e-01 94.7% 85.8%
8cdaC01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.52 45.0 4.28e-01 100.0% 88.0%
1zu4A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.51 34.0 3.58e-01 91.6% 75.9%
3mggA02 6.10.140.1580 Special › Helix non-globular › Helix Hairpins › 0.51 41.0 4.28e-01 94.7% 95.5%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030559 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.77 52.0 5.86e-01 76.8% 89.2%
3248284 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.73 58.0 5.63e-01 85.3% 85.7%
3616669 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.72 58.0 5.44e-01 86.3% 91.3%
4521374 12.5.1.10 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › Casc1_N 0.72 63.0 4.39e-01 94.7% 67.5%
4012748 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.72 60.0 4.15e-01 90.5% 57.1%
3267295 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.71 57.0 4.38e-01 86.3% 46.2%
3756535 604.1.1.5 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 0.70 57.0 5.34e-01 87.4% 83.5%
3327018 603.1.1.98 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 0.70 60.0 4.50e-01 93.7% 73.0%
3185031 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 59.0 4.97e-01 91.6% 59.5%
3579522 604.1.1.98 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 0.69 56.0 5.42e-01 86.3% 88.6%
3243589 109.4.1.590 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NopRA1 0.69 59.0 3.73e-01 92.6% 22.3%
3820045 603.1.1.118 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF7610 0.69 55.0 5.77e-01 86.3% 95.3%
3801688 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 55.0 5.37e-01 86.3% 88.6%
3524429 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 55.0 5.47e-01 86.3% 88.0%
3938862 604.1.1.98 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 0.69 55.0 5.31e-01 87.4% 83.6%
3781234 1065.1.1.0 ↗ alpha bundles › SPX domain › SPX domain › SPX domain 0.69 58.0 4.52e-01 92.6% 78.0%
3585432 604.1.1.98 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 0.68 56.0 5.23e-01 87.4% 80.9%
3792009 604.1.1.98 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 0.68 55.0 4.44e-01 87.4% 51.9%
3899960 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.68 54.0 5.39e-01 86.3% 88.0%
3444721 603.1.1.6 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.68 54.0 4.25e-01 85.3% 94.4%
3581267 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.68 55.0 5.66e-01 87.4% 93.3%
3481122 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.68 52.0 5.18e-01 83.2% 92.0%
4628458 604.1.1.226 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26877 0.67 53.0 5.52e-01 84.2% 97.6%
3939162 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 54.0 5.00e-01 87.4% 77.5%
3504303 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.66 53.0 5.27e-01 87.4% 96.0%
3640330 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.66 52.0 4.62e-01 85.3% 67.1%
4937575 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.66 52.0 5.32e-01 86.3% 91.1%
3715090 109.24.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 0.66 55.0 5.24e-01 93.7% 84.3%
3581262 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.66 53.0 5.40e-01 87.4% 94.4%
4115486 604.3.1.11 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.64 52.0 4.39e-01 89.5% 98.2%
3887886 604.3.1.11 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.63 53.0 3.98e-01 93.7% 95.5%
5012500 3843.1.1.6 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF 0.63 43.0 4.55e-01 70.5% 81.2%
4032867 601.1.1.11 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › EcsB 0.63 54.0 4.75e-01 94.7% 92.1%
3172093 604.1.1.132 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KAR9 0.62 49.0 4.57e-01 88.4% 93.6%
3712624 604.12.1.46 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DGF-1_C 0.61 46.0 4.89e-01 84.2% 96.2%
2773715 4266.1.1.4 ↗ alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like › Glyco_hydro_84_hel 0.60 50.0 4.42e-01 90.5% 95.7%
4441047 601.4.1.50 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › DUF6376 0.60 50.0 4.64e-01 93.7% 75.2%
4498502 3843.1.1.6 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF 0.60 42.0 4.30e-01 91.6% 72.6%
4928642 1075.1.2.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.59 49.0 4.33e-01 91.6% 78.6%
4253651 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.59 45.0 4.71e-01 88.4% 89.4%
4029940 604.5.1.44 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › EMC6 0.58 43.0 4.37e-01 84.2% 78.9%
4972074 1075.3.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.53 42.0 3.11e-01 88.4% 43.0%
4034377 4982.1.1.2 ↗ alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › RsbU_N 0.52 39.0 4.04e-01 83.2% 86.7%
3236850 601.55.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 0.51 41.0 3.98e-01 95.8% 79.0%
4222771 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.51 35.0 3.46e-01 92.6% 67.0%
5052279 632.1.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › BE_C 0.51 42.0 3.95e-01 91.6% 95.8%
3473137 604.9.1.2 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Strabismus 0.50 42.0 4.13e-01 92.6% 88.0%
4002689 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.50 42.0 4.22e-01 93.7% 95.8%
D5 medium residues 532-629
PDB
Domain cluster: rep: P94__YP_003422359__Pseudalatia_unipuncta_granulovirus__36355__D500-583
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6gyhA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.61 42.0 3.26e-01 70.4% 70.2%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 47.0 3.61e-01 84.7% 69.3%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 45.0 4.65e-01 82.7% 94.6%
3qc1A01 1.25.40.540 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family 0.58 43.0 3.76e-01 78.6% 98.0%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 36.0 4.24e-01 90.8% 100.0%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 46.0 4.26e-01 90.8% 75.4%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.56 39.0 4.19e-01 73.5% 94.1%
2ahfA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.55 48.0 3.30e-01 100.0% 51.2%
3hl6A02 1.20.58.700 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 40.0 3.83e-01 84.7% 67.0%
1bc0A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.53 36.0 3.83e-01 87.8% 80.2%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 39.0 4.33e-01 76.5% 100.0%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.53 36.0 3.56e-01 70.4% 78.7%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.52 37.0 3.55e-01 75.5% 70.1%
2pziB03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 39.0 3.45e-01 81.6% 53.3%
3wvoC02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.52 36.0 3.32e-01 72.4% 80.0%
4p3gD00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.50 41.0 3.44e-01 94.9% 72.3%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 36.0 3.37e-01 76.5% 93.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4061485 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.59 41.0 3.39e-01 72.4% 43.4%
3738901 109.10.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin 0.57 44.0 3.47e-01 82.7% 76.3%
4012148 604.13.1.0 ↗ alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like 0.55 47.0 4.54e-01 96.9% 81.7%
3108769 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.55 38.0 4.30e-01 91.8% 100.0%
3427458 109.4.1.1659 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nodulin_N 0.55 44.0 3.93e-01 87.8% 98.6%
4074824 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.55 39.0 3.94e-01 94.9% 74.0%
4002826 604.12.1.9 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 0.55 38.0 3.84e-01 73.5% 81.0%
165995 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.53 39.0 4.33e-01 76.5% 100.0%
3268622 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.53 39.0 3.88e-01 78.6% 78.1%
5003426 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 43.0 4.19e-01 92.9% 97.4%
4033957 4070.1.1.4 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50B 0.53 39.0 3.00e-01 79.6% 81.2%
3231982 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.52 45.0 3.80e-01 98.0% 97.6%
3670388 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 37.0 3.32e-01 75.5% 54.1%
3608758 604.12.1.8 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT 0.52 39.0 4.22e-01 99.0% 100.0%
3230196 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 40.0 3.82e-01 89.8% 70.8%
3626109 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.51 35.0 3.94e-01 86.7% 100.0%
3497029 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.51 37.0 3.75e-01 77.6% 78.0%
3193004 604.13.1.0 ↗ alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like 0.51 41.0 4.04e-01 90.8% 82.7%
4317544 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.51 37.0 3.76e-01 78.6% 96.0%
4943123 604.12.1.134 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › AAA 0.50 39.0 4.13e-01 98.0% 98.8%
D6 medium residues 630-688
PDB
Domain cluster: rep: 94K__YP_009249858__Mocis_latipes_granulovirus__2072024__D566-621