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pEP1242L
Euk-VirAfrican_swine_fever_virus
pEP1242L__YP_009703296__African_swine_fever_virus__10497
Identity
- Accession:
- YP_009703296 ↗
- Protein ID:
- pEP1242L
- Kingdom:
- euk
Quality
71.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Asfuvirales›
Asfarviridae›
Asfivirus›
African_swine_fever_virus
TaxID: 10497
Cluster
View cluster (58 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 830-875_990-1110
Domain cluster:
rep: KU935715.1__AND75470.1__ME3_309__00309__D264-326_420-534
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00562.34 best | RNA_pol_Rpb2_6 | 166.8 | 1.10e-48 | 74.9% | 33.8% |
| PF00562.34 | RNA_pol_Rpb2_6 | 42.5 | 6.90e-11 | 28.7% | 13.4% |
D2
high
residues 890-969
Domain cluster:
rep: hypothetical_protein_MIV009R__YP_654581__Invertebrate_iridescent_virus_3__345201__D796-874
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00562.34 best | RNA_pol_Rpb2_6 | 26.5 | 4.90e-06 | 97.5% | 18.5% |
D3
medium
residues 203-280
D4
medium
residues 1168-1242