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pF1055L
Euk-VirAfrican_swine_fever_virus
pF1055L__YP_009703290__African_swine_fever_virus__10497
Identity
- Accession:
- YP_009703290 ↗
- Protein ID:
- pF1055L
- Kingdom:
- euk
Quality
66.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Asfuvirales›
Asfarviridae›
Asfivirus›
African_swine_fever_virus
TaxID: 10497
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 274-370
D2
high
residues 559-699_744-799
Domain cluster:
rep: hypothetical_protein_IM014_gp081__YP_009927171__African_swine_fever_virus__10497__D551-581_626-644_678-784
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02399.22 best | Herpes_ori_bp | 30.3 | 1.80e-07 | 70.0% | 13.8% |
D3
medium
residues 1-84_182-214
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.67 | 35.0 | 4.11e-01 | 70.9% | 71.1% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.54 | 31.0 | 3.81e-01 | 92.3% | 93.0% |
| 5uv6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 29.0 | 3.35e-01 | 84.6% | 76.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3596656 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.77 | 64.0 | 4.83e-01 | 89.7% | 81.8% |
| 3802060 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.76 | 66.0 | 5.04e-01 | 93.2% | 81.2% |
D4
medium
residues 104-181_215-229
Domain cluster:
rep: helicase__YP_009702614__African_swine_fever_virus__10497__D101-165_212-224
D5
medium
residues 375-500
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02399.22 best | Herpes_ori_bp | 52.8 | 2.70e-14 | 94.4% | 13.8% |
D6
medium
residues 501-553
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ksfA00 | 1.20.120.620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Backbone structure of the membrane domain of e. Coli histidine kinase receptor kdpd, | 0.54 | 39.0 | 3.24e-01 | 81.1% | 68.2% |
| 2zuoA10 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.51 | 36.0 | 2.77e-01 | 73.6% | 54.4% |
D7
medium
residues 806-883
D8
medium
residues 905-1004