←Back to structures
pIIIa
Euk-VirBovine_atadenovirus_D
pIIIa__NP_077392__Bovine_atadenovirus_D__130499
Identity
- Accession:
- NP_077392 ↗
- Protein ID:
- pIIIa
- Kingdom:
- euk
Quality
62.5
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Bovine_atadenovirus_D
TaxID: 130499
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 257-346
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02455.22 best | Hex_IIIa | 123.1 | 2.10e-35 | 97.8% | 15.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gl5A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 43.0 | 3.37e-01 | 88.9% | 65.9% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.51 | 44.0 | 3.91e-01 | 100.0% | 85.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602900 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.70 | 44.0 | 3.90e-01 | 81.1% | 43.8% |
| 3261605 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.65 | 46.0 | 4.80e-01 | 100.0% | 82.5% |
| 3578554 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.54 | 42.0 | 2.58e-01 | 82.2% | 79.4% |
| 4425726 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.54 | 47.0 | 4.16e-01 | 98.9% | 87.4% |
| 4600685 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.53 | 46.0 | 4.05e-01 | 100.0% | 90.0% |
D2
medium
residues 1-60
Domain cluster:
rep: pIIIa__YP_004346924__Fowl_aviadenovirus_C__190063__D57-124
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02455.22 best | Hex_IIIa | 73.5 | 2.30e-20 | 100.0% | 12.1% |
D3
medium
residues 107-170_182-221
Domain cluster:
rep: pIIIa__YP_007347001__Bovine_adenovirus_6__111167__D107-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02455.22 best | Hex_IIIa | 112.8 | 2.80e-32 | 100.0% | 21.7% |