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pIIIa
Euk-VirBovine_adenovirus_6
pIIIa__YP_007347001__Bovine_adenovirus_6__111167
Identity
- Accession:
- YP_007347001 ↗
- Protein ID:
- pIIIa
- Kingdom:
- euk
Quality
63.0
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Bovine_adenovirus_6
TaxID: 111167
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 246-334
Domain cluster:
rep: pIIIa__NP_077392__Bovine_atadenovirus_D__130499__D257-346
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02455.22 best | Hex_IIIa | 137.6 | 8.20e-40 | 100.0% | 16.7% |
D2
medium
residues 1-106
Domain cluster:
rep: pIIIa__YP_004346924__Fowl_aviadenovirus_C__190063__D57-124
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02455.22 best | Hex_IIIa | 157.2 | 9.80e-46 | 100.0% | 20.6% |
D3
medium
residues 107-214
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02455.22 best | Hex_IIIa | 145.9 | 2.60e-42 | 100.0% | 20.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kafA00 | 3.40.30.150 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Coronavirus polyprotein cleavage domain | 0.50 | 25.0 | 3.02e-01 | 82.4% | 73.1% |
| 2e9xB01 | 3.40.5.50 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.50 | 23.0 | 2.80e-01 | 74.1% | 63.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4864637 | 7008.1.1.1 ↗ | alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa | 0.92 | 75.0 | 6.86e-01 | 84.3% | 67.4% |
| 2643578 | 7009.1.1.1 ↗ | alpha bundles › Middle domain of hexon-associated protein (IIIa) › Middle domain of hexon-associated protein (IIIa) › Middle domain of hexon-associated protein (IIIa) › Hex_IIIa | 0.91 | 76.0 | 6.90e-01 | 86.1% | 67.4% |
| 4823693 | 7008.1.1.1 ↗ | alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa | 0.83 | 72.0 | 6.44e-01 | 93.5% | 67.8% |
| 2387853 | 7009.1.1.1 ↗ | alpha bundles › Middle domain of hexon-associated protein (IIIa) › Middle domain of hexon-associated protein (IIIa) › Middle domain of hexon-associated protein (IIIa) › Hex_IIIa | 0.83 | 72.0 | 6.04e-01 | 93.5% | 57.9% |
| 4936865 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 42.0 | 4.01e-01 | 72.2% | 84.8% |
| 3178037 | 109.4.1.2223 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29062 | 0.53 | 46.0 | 3.32e-01 | 98.1% | 54.4% |
| 3259076 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 40.0 | 3.25e-01 | 87.0% | 89.1% |
| 3695265 | 3548.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Med31 | 0.51 | 26.0 | 2.59e-01 | 74.1% | 44.2% |
| 3817768 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.50 | 39.0 | 2.87e-01 | 87.0% | 63.3% |