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pIIIa

Euk-Vir

Bat_mastadenovirus_WIV12

pIIIa__YP_009272878__Bat_mastadenovirus_WIV12__1788434

Identity

Accession:: YP_009272878 ↗
Protein ID:: pIIIa
Kingdom:: euk

Quality

62.2 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Bat_mastadenovirus_WIV12

TaxID: 1788434

Cluster

View cluster (34 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 191-307

PDB

Domain cluster: rep: pIIIa__YP_007347001__Bovine_adenovirus_6__111167__D107-214

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02455.22 best	Hex_IIIa	101.4	7.80e-29	100.0%	22.1%

D2 high residues 354-418

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02455.22 best	Hex_IIIa	40.9	1.60e-10	100.0%	12.1%

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3e97A02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.66	53.0	5.03e-01	87.7%	91.0%
2yqzA02	1.10.8.900	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.66	47.0	4.66e-01	96.9%	72.1%
2f48A03	1.10.10.480	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3	0.61	51.0	4.95e-01	100.0%	84.0%
1cf7A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.60	44.0	4.45e-01	96.9%	82.1%
4dciA00	6.10.140.1110	Special › Helix non-globular › Helix Hairpins ›	0.58	42.0	3.30e-01	78.5%	64.6%
1td6A01	1.20.1480.10	Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1	0.58	48.0	4.22e-01	95.4%	71.6%
3anwA01	1.20.58.1030	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.58	39.0	3.25e-01	70.8%	41.6%
6a2aA01	1.50.10.130	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain	0.58	41.0	3.05e-01	96.9%	25.8%
3b0pA02	1.20.120.1460	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.58	44.0	4.23e-01	98.5%	73.3%
2prrA02	1.20.1290.10	Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like	0.57	44.0	3.66e-01	98.5%	44.9%
4b6xA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.56	39.0	3.85e-01	72.3%	69.6%
2vkzA02	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.54	43.0	2.96e-01	92.3%	60.3%
4izzB02	1.10.10.1680	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain	0.54	39.0	3.93e-01	95.4%	75.0%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5052346	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.75	55.0	5.70e-01	98.5%	83.3%
4026047	310.2.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF	0.69	49.0	4.49e-01	75.4%	87.1%
4520167	101.11.1.1 ↗	alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase	0.61	52.0	4.65e-01	98.5%	77.9%
3384318	601.33.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain	0.61	50.0	4.84e-01	92.3%	86.7%
3182215	192.2.1.31 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PRA1	0.57	40.0	3.37e-01	95.4%	45.7%
4464384	198.2.1.1 ↗	alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › Bacteriocin_IId	0.55	48.0	4.72e-01	100.0%	94.3%
3943148	101.1.1.63 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_28	0.54	39.0	4.29e-01	90.8%	100.0%
3266213	904.1.1.0 ↗	few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain	0.53	37.0	3.64e-01	76.9%	68.6%

D3 medium residues 106-170

PDB

Domain cluster: rep: pIIIa__YP_004346924__Fowl_aviadenovirus_C__190063__D57-124

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02455.22 best	Hex_IIIa	38.8	7.40e-10	90.8%	9.3%

D4 medium residues 313-340

PDB