pMGF_110-5L

Euk-Vir

African_swine_fever_virus

pMGF_110-5L__YP_009702578__African_swine_fever_virus__10497

Identity

79.7 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Asfuvirales› Asfarviridae› Asfivirus› African_swine_fever_virus

TaxID: 10497

View cluster (29 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-123

PDB

Domain cluster: rep: MGF_110-9L__YP_009703948__African_swine_fever_virus_Georgia_2007_1__874269__D28-104

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01639.23 best	v110	143.3	2.90e-42	86.6%	83.7%

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4phtY02	3.30.420.370	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain	0.67	30.0	3.71e-01	87.6%	66.1%
5tkwA02	3.30.420.370	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain	0.66	32.0	3.77e-01	87.6%	66.7%
2pt7C01	3.30.450.90	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase ›	0.63	31.0	3.09e-01	73.2%	41.5%
4n9jA02	3.30.1120.130	Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain ›	0.62	30.0	2.92e-01	86.6%	40.2%
2ldmA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.53	28.0	3.44e-01	82.5%	88.7%
1u3eM01	3.90.75.20	Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A ›	0.52	29.0	2.86e-01	91.8%	47.2%
4py5A01	3.30.310.10	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein	0.52	32.0	3.58e-01	77.3%	81.9%
1ukfA00	3.90.70.20	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.52	44.0	3.57e-01	93.8%	82.4%
1w97L02	3.30.420.370	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain	0.51	34.0	3.76e-01	92.8%	88.0%
3mazA00	3.30.505.10	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain	0.51	38.0	3.82e-01	80.4%	91.9%
3qijB03	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.50	32.0	3.32e-01	85.6%	69.7%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1677788	292.2.1.1 ↗	a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box	0.64	30.0	3.14e-01	84.5%	46.6%
3717674	292.2.1.1 ↗	a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box	0.64	31.0	3.24e-01	86.6%	48.9%
3912697	292.2.1.3 ↗	a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2	0.61	30.0	2.93e-01	88.7%	40.0%
3278801	4.1.1.297 ↗	beta barrels › SH3 › SH3 › SH3 › YajC	0.60	29.0	3.37e-01	81.4%	63.1%
4662947	4.1.1.297 ↗	beta barrels › SH3 › SH3 › SH3 › YajC	0.59	29.0	3.36e-01	81.4%	63.1%
4971724	3239.1.1.1 ↗	alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1	0.55	40.0	2.76e-01	77.3%	85.5%
5001237	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	32.0	3.16e-01	84.5%	60.0%
4000169	4161.1.1.0 ↗	beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like	0.50	42.0	3.11e-01	91.8%	46.2%
4079885	274.1.1.25 ↗	a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF	0.50	37.0	3.73e-01	78.4%	77.9%