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pMGF_360-14L

Euk-Vir

African_swine_fever_virus

pMGF_360-14L__YP_009702271__African_swine_fever_virus__10497

Identity

Accession:: YP_009702271 ↗
Protein ID:: pMGF_360-14L
Kingdom:: euk

Quality

80.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Asfuvirales› Asfarviridae› Asfivirus› African_swine_fever_virus

TaxID: 10497

Cluster

View cluster (84 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-60

PDB

Domain cluster: rep: pMGF_360-11L__YP_009703249__African_swine_fever_virus__10497__D1-59

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1pyiA01	4.10.240.10	Few Secondary Structures › Irregular › CD2-Gal4 › Zn(2)-C6 fungal-type DNA-binding domain	0.59	39.0	3.87e-01	81.7%	66.1%
3k6qA01	3.40.1620.10	Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain	0.56	34.0	3.74e-01	88.3%	77.1%
5t5dA00	3.40.35.10	Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component	0.51	38.0	2.99e-01	85.0%	80.0%
3qyfA01	3.40.50.10770	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like)	0.50	38.0	2.81e-01	83.3%	59.4%
2gsbA01	3.30.505.10	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain	0.50	38.0	3.51e-01	88.3%	79.8%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3262703	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.59	34.0	3.70e-01	90.0%	68.0%
3387898	2003.1.1.0 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains	0.57	43.0	3.63e-01	86.7%	61.8%
4946989	321.1.1.4 ↗	a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N	0.55	46.0	3.03e-01	100.0%	63.3%
5029301	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.51	38.0	2.69e-01	81.7%	50.8%

D2 medium residues 61-146

PDB

Domain cluster: rep: pMGF_360-13L__YP_009703257__African_swine_fever_virus__10497__D61-131

D3 medium residues 147-256

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01671.22 best	ASFV_360	105.3	4.80e-30	96.4%	42.3%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2i2xB01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.57	44.0	4.65e-01	94.5%	91.0%
2p58C00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.54	47.0	4.74e-01	97.3%	97.3%
4g26A01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	46.0	3.43e-01	100.0%	75.3%
3qwwA03	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	41.0	3.57e-01	89.1%	75.4%
3zh9B03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.52	38.0	3.63e-01	76.4%	78.6%
7c1iA01	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.52	31.0	3.20e-01	94.5%	62.0%
4ayoA00	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.51	45.0	3.07e-01	100.0%	50.2%

ECOD (22)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3273273	109.3.1.171 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011	0.73	55.0	4.62e-01	77.3%	54.3%
4349221	109.3.1.166 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3	0.73	51.0	3.99e-01	100.0%	35.6%
3253258	109.3.1.171 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011	0.72	54.0	4.63e-01	78.2%	56.5%
3276371	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.72	52.0	4.48e-01	74.5%	54.5%
3251248	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.68	49.0	3.38e-01	76.4%	28.7%
3253180	109.3.1.171 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011	0.64	57.0	4.60e-01	100.0%	66.5%
3591657	109.3.1.96 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4	0.63	47.0	4.35e-01	79.1%	64.8%
3275448	109.3.1.171 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011	0.62	51.0	4.17e-01	90.0%	59.5%
3829460	109.4.1.1280 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long	0.58	52.0	4.82e-01	100.0%	95.7%
3257618	109.3.1.171 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011	0.58	47.0	4.14e-01	86.4%	74.4%
3824200	109.4.1.189 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2	0.56	50.0	4.39e-01	100.0%	72.9%
3469372	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.56	50.0	4.68e-01	100.0%	89.6%
3198211	109.3.1.347 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_KRIT1	0.56	50.0	3.50e-01	100.0%	35.6%
3817217	109.4.1.1271 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24	0.56	48.0	4.10e-01	100.0%	64.6%
3350583	109.4.1.883 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2	0.55	49.0	3.93e-01	100.0%	72.4%
3435332	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.55	48.0	4.04e-01	100.0%	74.6%
3321887	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.55	48.0	3.84e-01	100.0%	50.8%
3682628	109.4.1.883 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2	0.55	48.0	4.51e-01	99.1%	85.0%
3173378	109.4.1.338 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1	0.55	50.0	3.84e-01	100.0%	86.5%
3300091	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.54	47.0	3.37e-01	99.1%	41.1%
3671483	109.4.1.883 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2	0.54	47.0	4.04e-01	100.0%	87.6%
3458771	109.4.1.1256 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3	0.53	46.0	3.99e-01	99.1%	80.6%

D4 medium residues 257-357

PDB

Domain cluster: rep: hypothetical_protein_IM014_gp179__YP_009927269__African_swine_fever_virus__10497__D257-351

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01671.22 best	ASFV_360	31.3	2.10e-07	50.5%	22.8%