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pMGF_360-19R
Euk-VirAfrican_swine_fever_virus
pMGF_360-19R__YP_009703448__African_swine_fever_virus__10497
Identity
- Accession:
- YP_009703448 ↗
- Protein ID:
- pMGF_360-19R
- Kingdom:
- euk
Quality
89.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Asfuvirales›
Asfarviridae›
Asfivirus›
African_swine_fever_virus
TaxID: 10497
Cluster
View cluster (84 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 222-356
Domain cluster:
rep: pMGF_360-2L__YP_009703222__African_swine_fever_virus__10497__D232-359
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01671.22 best | ASFV_360 | 164.3 | 4.30e-48 | 71.9% | 44.6% |
D2
medium
residues 49-208
Domain cluster:
rep: pMGF_360-4L__YP_009702257__African_swine_fever_virus__10497__D4-199
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01671.22 best | ASFV_360 | 162.8 | 1.20e-47 | 65.6% | 49.3% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7tj4A01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 35.0 | 3.97e-01 | 93.8% | 67.5% |
| 3b9qA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.53 | 30.0 | 3.86e-01 | 89.4% | 97.8% |
| 2ggfA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 35.0 | 3.80e-01 | 76.2% | 80.3% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 44.0 | 4.04e-01 | 95.6% | 71.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3998266 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 39.0 | 4.07e-01 | 96.9% | 64.8% |
| 3730605 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.57 | 34.0 | 3.87e-01 | 81.2% | 79.1% |
| 318680 | 109.4.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 | 0.52 | 35.0 | 3.80e-01 | 76.2% | 80.3% |
| 3380264 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.52 | 33.0 | 3.56e-01 | 90.6% | 73.6% |
| 4995646 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.50 | 42.0 | 4.07e-01 | 89.4% | 94.4% |