pP1192R

Euk-Vir

African_swine_fever_virus

pP1192R__YP_009703385__African_swine_fever_virus__10497

Identity

75.6 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Asfuvirales› Asfarviridae› Asfivirus› African_swine_fever_virus

TaxID: 10497

View cluster (39 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 418-575_614-656

PDB

Domain cluster: rep: DNA_topoisomerase_2__YP_009162467__Salmon_gill_poxvirus__1680908__D385-517_553-621_640-664

D2 high residues 708-848

PDB

Domain cluster: rep: DNA_topoisomerase_2__YP_009162467__Salmon_gill_poxvirus__1680908__D669-796

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00521.27 best	DNA_topoisoIV	96.9	1.80e-27	100.0%	30.9%

D3 high residues 899-1008

PDB

Domain cluster: rep: IMGVR_UViG_3300007985_000017-3300007985-Ga0100381_100027569__D212-299

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00521.27 best	DNA_topoisoIV	36.3	4.40e-09	97.3%	24.1%

D4 high residues 1032-1160

PDB

D5 medium residues 20-98_192-249

PDB

Domain cluster: rep: topoisomerase_II__YP_009702678__African_swine_fever_virus__10497__D58-99_191-247

D6 medium residues 99-191

PDB

Domain cluster: rep: GyrB-like_ATPase_domain_protein__YP_784274__Nile_crocodilepox_virus__1285600__D74-178

D7 medium residues 250-411

PDB

Domain cluster: rep: topoisomerase_IIA__YP_009001040__Pithovirus_sibericum__1450746__D250-321_335-390

D8 medium residues 657-707

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1oksA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.66	40.0	3.98e-01	78.4%	58.5%
4exjA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.61	49.0	3.69e-01	92.2%	37.2%
1r4gA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.61	36.0	3.59e-01	92.2%	56.6%
4hr1A00	1.20.1270.410	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.60	45.0	3.53e-01	84.3%	36.4%
1zvwA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.54	39.0	3.64e-01	78.4%	60.6%
2yf4F00	1.10.3420.10	Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain	0.53	46.0	3.41e-01	100.0%	53.1%
6qumQ00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.52	43.0	3.81e-01	92.2%	85.1%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4025939	1108.1.1.1 ↗	alpha complex topology › Zuotin homology domain (ZHD) › Zuotin homology domain (ZHD) › Zuotin homology domain (ZHD) › ZUO1-like_ZHD	0.64	48.0	3.29e-01	82.4%	49.2%
5022551	3788.1.1.0 ↗	alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr)	0.62	42.0	3.20e-01	86.3%	30.8%
3199170	223.2.1.9 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N	0.57	43.0	3.09e-01	86.3%	29.1%
3452232	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	46.0	3.09e-01	98.0%	37.7%
3609218	2004.1.1.420 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49	0.54	39.0	2.52e-01	80.4%	72.3%