pTP

Euk-Vir

Bovine_adenovirus_6

pTP__YP_007346999__Bovine_adenovirus_6__111167

Identity

69.9 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Barthadenovirus› Bovine_adenovirus_6

TaxID: 111167

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-126_572-598

PDB

Domain cluster: rep: pTP__YP_009051655__Lizard_adenovirus_2__874272__D3-127_576-605

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02459.21 best	Adeno_terminal	98.0	7.20e-28	57.6%	13.7%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1neiA00	3.30.160.220	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG	0.54	19.0	3.06e-01	94.0%	81.7%
4k3bA04	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.54	25.0	3.28e-01	76.8%	80.8%
2l66A00	2.10.260.10	Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D ›	0.52	20.0	3.11e-01	80.8%	94.3%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4614530	305.1.1.1 ↗	a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L	0.51	32.0	3.54e-01	98.7%	78.3%
5028837	304.114.1.0 ↗	a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain	0.50	23.0	3.18e-01	76.2%	90.0%

D2 high residues 129-191_427-566

PDB

Domain cluster: rep: DNA_terminal_protein_pTP__YP_005271183__bat_adenovirus_3__2758098__D124-193_404-566

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02459.21 best	Adeno_terminal	190.3	8.10e-56	72.9%	26.1%
PF02459.21	Adeno_terminal	56.2	3.40e-15	30.0%	10.9%

D3 high residues 198-284_301-333_375-423

PDB