pTP

Euk-Vir

Lizard_adenovirus_2

pTP__YP_009051655__Lizard_adenovirus_2__874272

Identity

70.6 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Barthadenovirus› Lizard_adenovirus_2

TaxID: 874272

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-127_576-605

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02459.21 best	Adeno_terminal	83.9	1.40e-23	58.7%	13.9%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4k3cA01	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.55	28.0	3.63e-01	76.8%	89.0%
1neiA00	3.30.160.220	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG	0.54	20.0	3.21e-01	94.2%	88.3%
3udcA03	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.53	28.0	3.58e-01	72.9%	89.8%
2l66A00	2.10.260.10	Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D ›	0.51	19.0	3.09e-01	79.4%	96.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5028837	304.114.1.0 ↗	a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain	0.52	24.0	3.33e-01	73.5%	91.4%

D2 high residues 130-171_432-570

PDB

Domain cluster: rep: pre-terminal_protein__YP_009272876__Bat_mastadenovirus_WIV12__1788434__D126-197_452-483_541-562

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02459.21 best	Adeno_terminal	148.1	4.90e-43	78.5%	24.3%
PF02459.21	Adeno_terminal	29.3	4.70e-07	25.4%	7.3%

D3 medium residues 203-279_300-327_376-430

PDB