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papain_cysteine_peptidase
Euk-VirTunisvirus_fontaine2
papain_cysteine_peptidase__YP_009506973__Tunisvirus_fontaine2__1421067
Identity
- Accession:
- YP_009506973 ↗
- Protein ID:
- papain_cysteine_peptidase
- Kingdom:
- euk
Quality
74.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Losannavirus›
Tunisvirus_fontaine2
TaxID: 1421067
Cluster
View cluster (48 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-21_55-71_230-316_393-412
Domain cluster:
rep: papain-like_cysteine_peptidase__YP_004347255__Lausannevirus__999883__D243-364
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00112.30 best | Peptidase_C1 | 71.0 | 2.30e-19 | 79.3% | 38.6% |
| PF03051.22 | Peptidase_C1_2 | 24.4 | 1.80e-05 | 48.1% | 10.3% |
D2
medium
residues 22-54_72-229_317-392
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00112.30 best | Peptidase_C1 | 37.9 | 2.90e-09 | 65.9% | 40.0% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fpwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.70 | 51.0 | 4.96e-01 | 74.5% | 87.0% |
| 3oisB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.68 | 50.0 | 5.03e-01 | 74.9% | 96.6% |
| 1deuB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 46.0 | 4.74e-01 | 74.5% | 98.1% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 49.0 | 4.33e-01 | 79.0% | 74.1% |
| 1xkgA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 47.0 | 4.57e-01 | 85.8% | 80.9% |
| 1jqpA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 43.0 | 4.70e-01 | 83.5% | 100.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4627786 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 44.0 | 4.31e-01 | 72.7% | 51.4% |
| 3617140 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.75 | 46.0 | 4.39e-01 | 72.7% | 53.2% |
| 3242975 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.73 | 54.0 | 4.94e-01 | 75.3% | 82.1% |
| 4377695 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.73 | 53.0 | 5.00e-01 | 73.8% | 87.9% |
| 3426348 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.73 | 44.0 | 5.56e-01 | 72.3% | 95.3% |
| 3519107 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.72 | 53.0 | 4.84e-01 | 75.3% | 87.0% |
| 3656345 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.71 | 52.0 | 4.73e-01 | 74.2% | 83.2% |
| 3392327 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.71 | 44.0 | 4.59e-01 | 72.7% | 66.0% |
| 3489030 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.71 | 52.0 | 4.88e-01 | 74.2% | 88.1% |
| 3723538 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.69 | 51.0 | 4.80e-01 | 74.5% | 97.4% |
| 3261680 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.69 | 51.0 | 4.93e-01 | 74.5% | 86.2% |
| 3564430 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.68 | 50.0 | 4.68e-01 | 74.5% | 87.2% |
| 3891882 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.67 | 49.0 | 4.82e-01 | 74.2% | 94.7% |
| 3940207 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.66 | 48.0 | 5.06e-01 | 73.8% | 100.0% |
| 3938586 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.66 | 48.0 | 4.93e-01 | 74.2% | 97.7% |
| 3479869 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 55.0 | 5.08e-01 | 85.8% | 87.3% |
| 4448672 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 48.0 | 4.52e-01 | 73.8% | 80.5% |
| 4024199 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 48.0 | 4.41e-01 | 74.2% | 79.6% |
| 3674165 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.65 | 47.0 | 4.76e-01 | 73.8% | 100.0% |
| 4024611 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 47.0 | 4.20e-01 | 73.8% | 78.8% |
| 4047160 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.65 | 47.0 | 5.00e-01 | 73.4% | 100.0% |
| 3865831 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 48.0 | 4.47e-01 | 75.7% | 80.0% |
| 3798944 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 47.0 | 4.89e-01 | 74.2% | 99.2% |
| 3234755 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 47.0 | 5.03e-01 | 73.8% | 99.6% |
| 3443485 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.64 | 48.0 | 4.27e-01 | 75.7% | 75.4% |
| 3486878 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.63 | 47.0 | 4.38e-01 | 74.5% | 84.7% |
| 3250297 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.63 | 52.0 | 5.11e-01 | 83.5% | 93.2% |
| 3940173 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.63 | 46.0 | 4.92e-01 | 73.4% | 100.0% |
| 3510485 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.63 | 46.0 | 4.29e-01 | 74.2% | 81.5% |
| 3497089 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 46.0 | 4.41e-01 | 74.5% | 87.2% |
| 3514367 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.62 | 46.0 | 4.57e-01 | 74.5% | 100.0% |
| 4978305 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.61 | 46.0 | 4.42e-01 | 75.7% | 88.5% |
| 3832249 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 41.0 | 4.06e-01 | 70.8% | 64.4% |
| 4429823 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 43.0 | 4.07e-01 | 74.5% | 72.0% |
| 3516722 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.59 | 53.0 | 3.94e-01 | 93.3% | 44.1% |
| 3452899 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 41.0 | 4.08e-01 | 71.2% | 100.0% |
| 2793930 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.57 | 52.0 | 4.89e-01 | 93.6% | 86.7% |
| 4127832 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 48.0 | 4.58e-01 | 86.5% | 80.3% |
| 4391291 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.56 | 47.0 | 5.02e-01 | 86.1% | 100.0% |
| 4663619 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.56 | 48.0 | 4.46e-01 | 88.8% | 98.2% |
| 3216614 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.55 | 50.0 | 4.64e-01 | 94.0% | 84.0% |
| None | — | 0.55 | 49.0 | 4.50e-01 | 93.3% | 77.9% | |
| 4024826 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.52 | 48.0 | 4.17e-01 | 94.8% | 92.0% |
| 3233596 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.52 | 47.0 | 4.79e-01 | 94.0% | 100.0% |
| 3514380 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.52 | 47.0 | 4.47e-01 | 94.0% | 87.9% |
| 3906939 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.51 | 47.0 | 4.47e-01 | 94.4% | 84.9% |