penton_base

Euk-Vir

Human_mastadenovirus_B

penton_base__YP_002213774__Human_mastadenovirus_B__108098

Identity

76.5 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Human_mastadenovirus_B

TaxID: 108098

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-132_406-450_485-541

PDB

Domain cluster: rep: capsid_protein_III__YP_009505659__Fowl_aviadenovirus_6__172862__D107-170_410-455_491-547

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01686.24 best	Adeno_Penton_B	130.7	8.00e-38	43.3%	16.5%
PF01686.24	Adeno_Penton_B	94.3	9.40e-27	33.1%	12.6%
PF01686.24	Adeno_Penton_B	57.3	1.50e-15	27.0%	10.0%

D2 medium residues 133-154_168-222_243-290_378-404

PDB

Domain cluster: rep: III__YP_003933585__Turkey_adenovirus_1__878329__D145-233_253-299_358-382

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01686.24 best	Adeno_Penton_B	108.0	6.40e-31	51.3%	17.2%
PF01686.24	Adeno_Penton_B	88.7	4.60e-25	33.6%	10.9%

D3 medium residues 223-242_291-308_351-377

PDB

Domain cluster: rep: III__YP_004123742__Murine_adenovirus_2__931972__D200-218_268-311

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01686.24 best	Adeno_Penton_B	32.4	5.50e-08	70.8%	11.1%