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penton_base
Euk-VirTurkey_aviadenovirus_5
penton_base__YP_008719856__Turkey_aviadenovirus_5__1408258
Identity
- Accession:
- YP_008719856 ↗
- Protein ID:
- penton_base
- Kingdom:
- euk
Quality
72.9
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Aviadenovirus›
turkey_adenovirus_5
TaxID: 1408258
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 121-140_376-422_457-513
Domain cluster:
rep: capsid_protein_III__YP_009505659__Fowl_aviadenovirus_6__172862__D107-170_410-455_491-547
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 88.0 | 7.40e-25 | 47.6% | 12.4% |
| PF01686.24 | Adeno_Penton_B | 50.5 | 1.70e-13 | 41.1% | 10.4% |
D2
high
residues 144-234_248-298_350-369
Domain cluster:
rep: III__YP_003933585__Turkey_adenovirus_1__878329__D145-233_253-299_358-382
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 197.2 | 5.60e-58 | 100.0% | 33.9% |
D3
medium
residues 235-247_299-349
Domain cluster:
rep: capsid_protein_III__YP_009047098__Pigeon_adenovirus_1__764030__D267-277_329-378
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 28.0 | 1.10e-06 | 89.1% | 11.1% |