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penton_base
Euk-VirLizard_adenovirus_2
penton_base__YP_009051658__Lizard_adenovirus_2__874272
Identity
- Accession:
- YP_009051658 ↗
- Protein ID:
- penton_base
- Kingdom:
- euk
Quality
75.0
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Lizard_adenovirus_2
TaxID: 874272
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-97_310-348_400-447
Domain cluster:
rep: capsid_protein_III__YP_009505659__Fowl_aviadenovirus_6__172862__D107-170_410-455_491-547
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 112.9 | 2.00e-32 | 46.2% | 15.7% |
| PF01686.24 | Adeno_Penton_B | 76.6 | 2.10e-21 | 30.6% | 10.4% |
| PF01686.24 | Adeno_Penton_B | 38.7 | 6.60e-10 | 26.9% | 8.3% |
D2
medium
residues 100-175_195-242_283-305
Domain cluster:
rep: III__YP_003933585__Turkey_adenovirus_1__878329__D145-233_253-299_358-382
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 105.0 | 5.30e-30 | 52.4% | 16.7% |
| PF01686.24 | Adeno_Penton_B | 82.6 | 3.20e-23 | 34.0% | 10.7% |
D3
medium
residues 176-194_243-282
Domain cluster:
rep: III__YP_004123742__Murine_adenovirus_2__931972__D200-218_268-311