penton_base

Euk-Vir

Bat_mastadenovirus_WIV9

penton_base__YP_009246351__Bat_mastadenovirus_WIV9__1788436

Identity

77.7 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Bat_mastadenovirus_WIV9

TaxID: 1788436

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 127-284_304-356

PDB

Domain cluster: rep: penton_base__YP_009272879__Bat_mastadenovirus_WIV12__1788434__D125-337

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01686.24 best	Adeno_Penton_B	335.2	7.60e-100	100.0%	46.7%

D2 medium residues 62-105_457-502

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01686.24 best	Adeno_Penton_B	81.7	5.80e-23	54.4%	10.4%
PF01686.24	Adeno_Penton_B	61.8	6.40e-17	50.0%	9.6%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1x9pA01	2.60.120.550	Mainly Beta › Sandwich › Jelly Rolls › Penton protein; domain 1	0.86	80.0	6.38e-01	97.8%	86.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3551058	11.1.1.178 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2	0.52	34.0	3.40e-01	92.2%	64.2%

D3 medium residues 106-124_376-456

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01686.24 best	Adeno_Penton_B	116.5	1.70e-33	82.0%	17.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3929065	872.1.1.0 ↗	a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like	0.55	30.0	3.80e-01	86.0%	94.5%