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penton_base
Euk-VirOdocoileus_adenovirus_1
penton_base__YP_009414579__Odocoileus_adenovirus_1__78522
Identity
- Accession:
- YP_009414579 ↗
- Protein ID:
- penton_base
- Kingdom:
- euk
Quality
82.3
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Odocoileus_adenovirus_1
TaxID: 78522
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-96_399-446
Domain cluster:
rep: capsid_protein_III__YP_009505659__Fowl_aviadenovirus_6__172862__D107-170_410-455_491-547
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 124.2 | 7.70e-36 | 64.8% | 16.7% |
| PF01686.24 | Adeno_Penton_B | 80.2 | 1.70e-22 | 41.0% | 10.9% |
D2
high
residues 101-175_195-243_281-302
Domain cluster:
rep: III__YP_003933585__Turkey_adenovirus_1__878329__D145-233_253-299_358-382
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 106.6 | 1.70e-30 | 52.0% | 16.5% |
| PF01686.24 | Adeno_Penton_B | 87.4 | 1.10e-24 | 36.3% | 11.1% |
D3
medium
residues 176-194_244-280
Domain cluster:
rep: III__YP_004123742__Murine_adenovirus_2__931972__D200-218_268-311
D4
medium
residues 348-397