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penton_base
Euk-VirPsittacine_aviadenovirus_B
penton_base__YP_009508605__Psittacine_aviadenovirus_B__2169709
Identity
- Accession:
- YP_009508605 ↗
- Protein ID:
- penton_base
- Kingdom:
- euk
Quality
76.2
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Aviadenovirus›
Psittacine_aviadenovirus_B
TaxID: 2169709
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 89-154_396-431_483-531
Domain cluster:
rep: capsid_protein_III__YP_009505659__Fowl_aviadenovirus_6__172862__D107-170_410-455_491-547
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 105.7 | 3.20e-30 | 46.4% | 14.8% |
| PF01686.24 | Adeno_Penton_B | 69.8 | 2.40e-19 | 32.5% | 10.7% |
| PF01686.24 | Adeno_Penton_B | 36.2 | 3.90e-09 | 25.8% | 8.0% |
D2
medium
residues 155-246_265-314_374-395
Domain cluster:
rep: III__YP_003933585__Turkey_adenovirus_1__878329__D145-233_253-299_358-382
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 107.0 | 1.30e-30 | 57.9% | 17.4% |
| PF01686.24 | Adeno_Penton_B | 82.9 | 2.60e-23 | 32.9% | 10.9% |
D3
medium
residues 247-264_315-373
Domain cluster:
rep: III__YP_004123742__Murine_adenovirus_2__931972__D200-218_268-311
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 39.1 | 4.90e-10 | 77.9% | 12.0% |
D4
medium
residues 432-482
Domain cluster:
rep: penton_base__YP_009109577__Simian_adenovirus_DM-2014__1560346__D385-434
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01686.24 best | Adeno_Penton_B | 50.1 | 2.30e-13 | 100.0% | 10.7% |