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phosphohydrolase

Euk-Vir

Noumeavirus

phosphohydrolase__YP_009345578__Noumeavirus__1955558

Identity

Accession:
YP_009345578 ↗
Protein ID:
phosphohydrolase
Kingdom:
euk

Quality

80.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Noumeavirus

TaxID: 1955558

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-125
PDB
Domain cluster: rep: NC_048757.1__YP_009844874.1__HWC13_gp065__00065__D3-109_211-253
CATH (73)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2h0aA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 53.0 5.51e-01 86.1% 81.2%
1k68A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 57.0 5.48e-01 86.1% 88.6%
1t5bB00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.70 57.0 4.83e-01 86.9% 99.0%
3cu5B00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 56.0 5.54e-01 86.1% 89.1%
4fleA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.70 56.0 4.81e-01 86.1% 92.3%
3kjxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 56.0 5.50e-01 86.1% 82.7%
1akqA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.69 56.0 5.31e-01 86.9% 93.2%
1wl8A00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.69 56.0 4.81e-01 86.9% 95.7%
6xehA01 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 55.0 5.80e-01 86.1% 96.4%
3cnbA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 56.0 5.57e-01 86.9% 91.9%
2ayxA01 3.40.50.10970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 53.0 5.52e-01 90.2% 88.6%
3khtA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 55.0 5.37e-01 86.1% 92.4%
3p0rA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.68 55.0 4.63e-01 86.9% 99.0%
7wwfA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.68 55.0 4.25e-01 86.9% 97.1%
1i1qB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.68 55.0 4.77e-01 86.9% 95.7%
4cujA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 55.0 5.34e-01 86.9% 87.2%
7c2xA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.67 56.0 4.28e-01 89.3% 88.8%
4kvfA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 55.0 5.04e-01 87.7% 84.4%
3t6kA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 54.0 5.48e-01 86.9% 91.8%
2qvgA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 54.0 5.37e-01 86.9% 93.0%
1dxyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 53.0 5.21e-01 86.1% 87.2%
4p0tB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 54.0 5.06e-01 86.9% 82.0%
2yq5C01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 53.0 5.21e-01 86.1% 88.0%
1j4aD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 53.0 5.18e-01 86.1% 86.7%
2yxlA04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 53.0 4.44e-01 84.4% 89.8%
6qrjA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 53.0 5.57e-01 86.9% 95.4%
4zylB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 53.0 5.06e-01 86.9% 88.2%
4xkjA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 52.0 5.02e-01 85.2% 85.3%
6zxbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 52.0 5.16e-01 86.1% 85.4%
3ffrA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.65 53.0 4.23e-01 88.5% 57.5%
3uowB01 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.64 52.0 4.52e-01 86.9% 93.5%
1zghA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.64 52.0 4.71e-01 86.9% 86.1%
4wzzA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 54.0 4.95e-01 91.8% 84.6%
2fexA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.64 55.0 4.81e-01 95.1% 98.9%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 46.0 3.92e-01 77.0% 51.9%
4xa8A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 49.0 4.99e-01 86.9% 85.6%
7f1uA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.63 52.0 4.15e-01 90.2% 56.9%
2oqrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 41.0 4.83e-01 75.4% 100.0%
3gzdA03 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 50.0 4.32e-01 88.5% 76.3%
1rkuA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.61 50.0 5.20e-01 88.5% 97.3%
4m37A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 43.0 4.04e-01 73.8% 74.5%
1gwcA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 36.0 4.25e-01 86.9% 90.0%
4hz2A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 39.0 4.62e-01 91.0% 100.0%
3uenA02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.59 39.0 4.13e-01 88.5% 76.2%
6srbA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 35.0 4.09e-01 86.9% 83.9%
3m0fA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 37.0 4.47e-01 90.2% 100.0%
2vvpC00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.57 46.0 4.24e-01 86.1% 77.2%
3o2sB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 44.0 4.29e-01 86.9% 73.9%
3lovA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 4.32e-01 86.9% 94.1%
1cjcA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 46.0 3.82e-01 86.1% 66.4%
1z9hA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 35.0 4.17e-01 87.7% 93.8%
3iwaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 4.29e-01 87.7% 96.8%
4emiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 4.09e-01 86.9% 97.2%
5es6A01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.57 51.0 4.43e-01 100.0% 92.6%
6pd2A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 45.0 3.68e-01 88.5% 100.0%
4p02B02 3.30.379.20 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › 0.56 44.0 4.42e-01 87.7% 83.6%
1f8wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 46.0 4.19e-01 90.2% 97.6%
3m33A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 49.0 4.11e-01 97.5% 75.8%
5zfgA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 36.0 4.21e-01 89.3% 98.8%
1k0dB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 36.0 3.93e-01 88.5% 82.5%
4kd5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 47.0 4.76e-01 97.5% 95.9%
3l8uA00 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.54 43.0 4.03e-01 86.9% 88.3%
1js1Y01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.54 43.0 3.94e-01 86.9% 73.8%
1y1lA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 43.0 4.35e-01 86.9% 96.8%
4agsA03 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 35.0 4.06e-01 89.3% 95.3%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 46.0 3.76e-01 97.5% 78.4%
4yapA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 35.0 3.54e-01 98.4% 65.1%
3onmA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 39.0 4.28e-01 86.9% 96.9%
4jwoA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 45.0 4.35e-01 97.5% 83.7%
4n13A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 43.0 4.40e-01 96.7% 94.8%
1u14A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.52 42.0 3.79e-01 86.1% 95.9%
4rjzA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 44.0 3.89e-01 97.5% 80.5%
5f7vA00 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 43.0 3.10e-01 97.5% 78.9%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929114 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.85 80.0 6.72e-01 100.0% 75.4%
3647976 2006.1.2.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.85 80.0 6.26e-01 100.0% 69.6%
5011585 2006.1.2.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.83 79.0 6.64e-01 100.0% 79.5%
5078790 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.83 78.0 6.77e-01 100.0% 76.1%
5035706 2006.1.2.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.80 70.0 6.06e-01 100.0% 62.8%
5029884 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.77 73.0 5.86e-01 100.0% 68.2%
4653607 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.76 63.0 5.30e-01 86.9% 67.7%
4370367 2003.1.1.120 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.75 61.0 5.39e-01 86.9% 76.6%
1720143 2007.12.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain 0.74 62.0 5.64e-01 88.5% 75.3%
3938013 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.73 66.0 4.71e-01 100.0% 98.3%
4613567 2003.1.1.120 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.71 58.0 5.13e-01 86.9% 79.4%
3395672 2006.1.2.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.70 65.0 5.16e-01 100.0% 82.9%
4486652 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.70 57.0 4.96e-01 86.9% 70.8%
3945512 7512.1.1.7 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_9 0.70 57.0 5.18e-01 86.9% 82.2%
3587300 2007.2.2.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.70 45.0 5.14e-01 86.9% 87.8%
3989152 2007.2.2.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.69 43.0 4.81e-01 86.9% 80.0%
3387039 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.69 56.0 5.56e-01 86.1% 84.8%
3590625 2007.2.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like 0.69 43.0 4.79e-01 86.1% 80.0%
4315679 2007.1.4.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.68 44.0 5.04e-01 87.7% 88.9%
4970985 2003.1.5.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › BpsA_C 0.67 48.0 3.67e-01 74.6% 78.9%
4945972 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.67 53.0 4.30e-01 86.1% 72.1%
4682409 2007.1.12.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.66 55.0 3.98e-01 89.3% 37.9%
5042941 2007.1.3.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Oxidored_q6 0.66 53.0 4.90e-01 86.9% 82.5%
5037072 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.66 53.0 5.42e-01 86.9% 97.5%
4098217 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.66 54.0 4.73e-01 88.5% 69.7%
4443137 2007.1.2.29 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L 0.66 55.0 4.77e-01 89.3% 69.7%
3724978 7579.1.1.92 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 0.66 52.0 4.10e-01 86.1% 94.4%
5077881 2007.1.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.66 53.0 4.64e-01 86.9% 94.6%
4112442 2007.1.2.29 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L 0.66 54.0 4.24e-01 89.3% 48.7%
4662267 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.66 54.0 4.58e-01 88.5% 63.5%
3949388 2007.1.3.40 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exonuc_VII_L 0.66 54.0 4.61e-01 89.3% 64.5%
4057479 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.66 54.0 4.03e-01 88.5% 41.6%
4576763 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 54.0 4.08e-01 88.5% 43.4%
2068250 2003.1.11.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like 0.65 48.0 5.26e-01 83.6% 97.9%
4461540 2007.1.2.29 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L 0.65 54.0 4.77e-01 88.5% 73.7%
4393576 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 53.0 4.14e-01 86.9% 48.1%
4236872 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 53.0 4.22e-01 88.5% 50.6%
4650998 3755.3.1.562 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Exonuc_VII_L 0.65 53.0 4.13e-01 86.9% 47.3%
5019768 7597.1.1.0 ↗ a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.65 55.0 5.74e-01 88.5% 98.2%
4284799 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 53.0 4.16e-01 88.5% 47.9%
4139792 2007.1.3.40 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exonuc_VII_L 0.65 54.0 4.82e-01 89.3% 75.9%
4477251 2007.1.9.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.65 53.0 3.98e-01 88.5% 41.0%
5016586 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 52.0 4.17e-01 86.1% 50.6%
3839845 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 54.0 4.17e-01 89.3% 48.9%
4264208 2007.1.9.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.65 53.0 4.54e-01 88.5% 64.0%
3982513 1.1.7.125 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Exonuc_VII_L 0.65 52.0 5.11e-01 86.9% 92.6%
4641415 2007.1.9.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.65 53.0 4.11e-01 88.5% 46.2%
4209330 2007.1.2.29 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L 0.65 53.0 4.58e-01 88.5% 66.2%
4355401 2007.1.9.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.65 53.0 4.77e-01 89.3% 73.1%
4277733 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 53.0 4.54e-01 87.7% 63.6%
4643564 2007.1.3.40 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exonuc_VII_L 0.65 52.0 4.04e-01 86.1% 45.9%
4068348 2007.1.9.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.65 53.0 4.21e-01 89.3% 51.0%
4628425 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 53.0 4.72e-01 88.5% 72.6%
4219362 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 53.0 4.73e-01 87.7% 71.8%
3975367 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.65 53.0 3.95e-01 89.3% 40.3%
4451121 2007.1.2.29 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L 0.65 53.0 4.20e-01 89.3% 49.8%
4364276 2007.1.9.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.64 53.0 4.65e-01 89.3% 71.4%
3971710 2.1.1.280 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Exonuc_VII_L 0.64 52.0 4.69e-01 86.1% 74.5%
4633951 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.64 52.0 4.00e-01 87.7% 43.5%
3965997 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.64 52.0 5.18e-01 86.9% 88.0%
4147766 2007.1.12.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.64 52.0 3.83e-01 87.7% 38.2%
4376354 2007.1.9.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.64 52.0 4.14e-01 89.3% 50.6%
4450697 2007.1.12.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.64 52.0 3.96e-01 89.3% 43.7%
3987969 4.1.1.392 ↗ beta barrels › SH3 › SH3 › SH3 › Exonuc_VII_L 0.63 52.0 4.53e-01 89.3% 67.4%
4039050 2007.1.3.40 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exonuc_VII_L 0.63 52.0 4.44e-01 89.3% 64.5%
4876510 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.61 53.0 4.21e-01 95.1% 96.1%
5048626 2007.1.3.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Oxidored_q6 0.61 49.0 4.52e-01 86.9% 75.6%
3397788 2485.1.1.73 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_5 0.60 34.0 4.27e-01 85.2% 100.0%
4948293 206.1.3.21 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.60 49.0 3.71e-01 86.9% 97.2%
4618065 2007.1.5.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race 0.57 46.0 3.56e-01 86.9% 77.5%
3316420 2485.1.1.13 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N 0.57 37.0 4.40e-01 90.2% 100.0%
5043418 2003.1.5.2 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD 0.56 51.0 4.37e-01 100.0% 68.7%
3169786 11.1.1.476 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAPPC9-Trs120 0.56 45.0 4.07e-01 86.9% 86.5%
4032662 2007.2.2.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › LMWPc 0.55 44.0 4.24e-01 86.9% 95.7%
4034385 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.54 38.0 4.02e-01 95.9% 80.9%
4016342 2003.1.5.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.54 42.0 3.26e-01 83.6% 80.7%
4971937 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.52 42.0 3.83e-01 86.1% 99.4%
4977268 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.52 42.0 3.57e-01 86.1% 91.0%
4043513 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.52 47.0 3.75e-01 100.0% 92.7%
3607612 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 30.0 3.68e-01 86.9% 97.1%
4396900 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.52 46.0 3.68e-01 100.0% 91.2%
4299287 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.51 41.0 3.67e-01 86.1% 93.1%
3972020 7523.1.1.15 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.50 43.0 3.66e-01 95.1% 99.0%
3969547 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.50 39.0 4.19e-01 96.7% 99.0%
D2 high residues 178-285
PDB
Domain cluster: rep: DHH_family_phosphohydrolase__YP_003406875__Marseillevirus_marseillevirus__694581__D183-267
D3 high residues 302-391
PDB
Domain cluster: rep: hypothetical_protein_LAU_0004__YP_004346972__Lausannevirus__999883__D19-105
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 41.0 5.15e-01 97.8% 98.1%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 36.0 4.75e-01 90.0% 92.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 35.0 4.70e-01 90.0% 93.8%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 44.0 3.76e-01 98.9% 41.8%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 40.0 4.13e-01 92.2% 70.2%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 33.0 4.34e-01 86.7% 100.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.55 34.0 3.81e-01 92.2% 82.1%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.65e-01 94.4% 69.7%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 39.0 4.87e-01 93.3% 87.3%
1145920 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 37.0 3.91e-01 94.4% 59.0%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 45.0 4.46e-01 100.0% 66.3%
3950458 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.63 35.0 2.78e-01 95.6% 26.7%
3409941 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.61 35.0 3.87e-01 82.2% 71.4%
3796536 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.59 38.0 3.99e-01 83.3% 72.5%
3618804 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.57 38.0 3.92e-01 85.6% 71.8%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.52e-01 95.6% 83.0%
3625996 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.55 44.0 4.25e-01 85.6% 91.0%
3621272 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.55 43.0 3.80e-01 85.6% 69.6%
3576800 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.54 43.0 4.26e-01 85.6% 94.7%
5022491 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.53 35.0 3.57e-01 94.4% 70.6%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.52 40.0 4.05e-01 94.4% 81.1%
3411192 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.51 31.0 3.48e-01 70.0% 89.8%