Back to structures

phosphoprotein

Euk-Vir

Landjia_virus

phosphoprotein__YP_009362134__Landjia_virus__1272947

Identity

Accession:
YP_009362134 ↗
Protein ID:
phosphoprotein
Kingdom:
euk

Quality

68.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 86-133
PDB
Domain cluster: representative
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.79 61.0 5.19e-01 100.0% 51.2%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 61.0 4.20e-01 87.5% 27.3%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.77 62.0 5.20e-01 100.0% 51.8%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.76 57.0 5.18e-01 97.9% 59.7%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 56.0 4.95e-01 100.0% 55.4%
2d56A00 3.30.30.110 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Antibacterial factor-related peptide 0.73 55.0 5.38e-01 87.5% 75.5%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.72 42.0 4.76e-01 79.2% 96.4%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.72 59.0 5.23e-01 97.9% 62.7%
2xmjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 54.0 5.03e-01 100.0% 65.1%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.71 55.0 4.02e-01 85.4% 32.8%
1tkjA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.71 48.0 3.01e-01 72.9% 39.0%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 62.0 4.67e-01 100.0% 43.1%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 56.0 3.67e-01 89.6% 89.4%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.69 50.0 4.35e-01 100.0% 50.7%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.69 49.0 4.39e-01 100.0% 52.8%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 55.0 3.60e-01 89.6% 89.4%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.68 56.0 4.35e-01 100.0% 50.0%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 58.0 4.86e-01 100.0% 62.1%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 58.0 4.98e-01 100.0% 61.3%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 54.0 4.46e-01 100.0% 47.4%
1f2uB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 53.0 3.88e-01 91.7% 31.0%
1xhsA00 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.66 58.0 4.41e-01 100.0% 82.3%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.66 50.0 4.44e-01 83.3% 94.3%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.66 50.0 3.77e-01 97.9% 32.3%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.65 50.0 4.51e-01 100.0% 59.2%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.65 56.0 4.05e-01 100.0% 34.6%
6kbyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.65 48.0 2.94e-01 85.4% 92.5%
4bqqB02 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.65 45.0 2.93e-01 72.9% 44.7%
1kblA06 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.65 53.0 4.22e-01 91.7% 89.8%
2avdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 52.0 3.46e-01 95.8% 98.6%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.65 46.0 3.07e-01 75.0% 98.9%
3c3pA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 54.0 3.62e-01 95.8% 96.5%
2dt8A02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.64 52.0 4.01e-01 100.0% 95.4%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.64 48.0 4.14e-01 100.0% 48.8%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.64 44.0 3.63e-01 72.9% 95.6%
3emiA00 3.90.1780.10 Alpha Beta › Alpha-Beta Complex › Trimeric adhesin › Trimeric adhesin 0.63 41.0 3.20e-01 87.5% 29.1%
6j09A02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.63 52.0 4.54e-01 97.9% 92.3%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.62 46.0 3.43e-01 97.9% 28.8%
6j09A04 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.62 49.0 4.39e-01 95.8% 92.2%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.62 45.0 3.79e-01 79.2% 47.6%
3f1yA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.61 51.0 3.09e-01 93.8% 25.8%
6wimA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.61 46.0 4.29e-01 97.9% 94.6%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 47.0 2.92e-01 87.5% 88.0%
1ulqA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 47.0 3.30e-01 91.7% 87.1%
4bzaA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.60 51.0 4.64e-01 100.0% 95.6%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 48.0 3.34e-01 97.9% 52.2%
2ch0A01 1.10.10.1180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain 0.57 38.0 3.17e-01 70.8% 43.9%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 46.0 4.23e-01 100.0% 69.2%
3ntvA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 50.0 3.30e-01 100.0% 39.0%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 50.0 3.15e-01 97.9% 66.1%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 48.0 3.45e-01 100.0% 44.9%
3og5A01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.57 45.0 3.95e-01 100.0% 88.2%
3p9aF00 1.10.132.80 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.57 49.0 3.63e-01 100.0% 77.6%
4ymhD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 47.0 3.12e-01 100.0% 38.5%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 48.0 3.22e-01 100.0% 38.3%
3wkmB01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.55 43.0 3.49e-01 87.5% 76.6%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.54 42.0 3.29e-01 93.8% 38.7%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.54 43.0 2.69e-01 87.5% 15.1%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 3.68e-01 97.9% 58.2%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.53 41.0 3.79e-01 95.8% 67.6%
4ciuA04 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 43.0 3.64e-01 97.9% 64.5%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 37.0 3.02e-01 72.9% 50.5%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 42.0 2.79e-01 100.0% 46.8%
3hnrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 45.0 3.06e-01 100.0% 51.3%
2pcrA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.52 40.0 3.18e-01 97.9% 37.4%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 3.90e-01 100.0% 76.6%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 37.0 3.29e-01 77.1% 54.2%
4pcaB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 2.73e-01 100.0% 37.6%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3188029 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.85 64.0 5.62e-01 97.9% 55.7%
3738706 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.81 69.0 5.08e-01 100.0% 37.5%
5080958 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.81 65.0 5.62e-01 100.0% 57.3%
4027999 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.80 62.0 5.11e-01 100.0% 48.2%
4997777 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 58.0 4.83e-01 100.0% 47.1%
4981202 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.77 59.0 5.17e-01 100.0% 56.0%
4514876 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.77 66.0 5.89e-01 100.0% 74.3%
5034013 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.76 60.0 5.25e-01 100.0% 57.3%
3603400 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.75 66.0 5.67e-01 100.0% 64.0%
3723914 327.11.2.40 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF31052 0.75 56.0 5.12e-01 100.0% 61.5%
4416593 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.73 60.0 5.08e-01 100.0% 57.8%
3922189 601.48.1.0 alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain 0.72 50.0 4.39e-01 100.0% 50.0%
3984011 206.1.1.33 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › OspG_kinase 0.72 59.0 4.12e-01 97.9% 26.9%
4080136 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.72 55.0 4.75e-01 100.0% 53.3%
4995849 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.71 55.0 4.49e-01 100.0% 45.6%
4980122 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.71 59.0 4.56e-01 100.0% 43.3%
5027827 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.71 60.0 5.08e-01 100.0% 60.0%
4932448 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.70 60.0 4.97e-01 100.0% 57.8%
3627616 3636.1.1.3 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain › ARCH_RTEL1 0.69 54.0 3.63e-01 83.3% 89.1%
4996620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 60.0 4.96e-01 100.0% 76.7%
4957337 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.69 58.0 4.94e-01 100.0% 63.5%
4978789 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 4.79e-01 100.0% 69.5%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 49.0 4.27e-01 100.0% 47.5%
4479016 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.69 50.0 3.92e-01 100.0% 35.5%
3220364 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.68 49.0 3.17e-01 83.3% 18.0%
5078195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.15e-01 100.0% 68.0%
1641233 4019.1.1.3 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.68 46.0 3.17e-01 70.8% 22.3%
3803027 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.68 52.0 5.09e-01 100.0% 77.8%
5045683 2011.1.1.8 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.68 55.0 3.40e-01 91.7% 16.1%
5049729 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 5.02e-01 100.0% 68.0%
4443601 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.67 53.0 4.65e-01 100.0% 60.0%
4107395 3121.1.1.0 a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain 0.67 56.0 4.91e-01 97.9% 92.0%
2756995 7581.1.1.9 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_C 0.66 48.0 3.47e-01 77.1% 29.0%
5067363 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.66 50.0 4.37e-01 100.0% 52.5%
5080331 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 54.0 4.36e-01 100.0% 53.3%
3848891 304.151.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 0.65 55.0 4.46e-01 100.0% 49.0%
3272269 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 48.0 3.10e-01 79.2% 26.4%
4496753 241.1.1.8 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2170 0.65 50.0 3.80e-01 100.0% 33.1%
5036338 304.48.1.31 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Cas10-Cmr2_palm2 0.65 58.0 3.67e-01 100.0% 42.1%
3502651 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 47.0 4.68e-01 97.9% 76.0%
5060820 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.65 55.0 3.21e-01 100.0% 80.7%
4959193 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.64 51.0 4.40e-01 100.0% 54.1%
4484852 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.64 55.0 4.25e-01 100.0% 60.0%
4502232 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.64 52.0 4.56e-01 100.0% 60.0%
5058176 206.1.3.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N 0.63 54.0 3.39e-01 100.0% 49.6%
5046112 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.63 53.0 3.44e-01 95.8% 69.2%
3725706 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 3.35e-01 70.8% 51.0%
3604405 2003.1.5.165 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11, Methyltransf_23 0.62 46.0 2.97e-01 81.2% 87.9%
3465508 10.12.1.53 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.62 45.0 2.96e-01 77.1% 84.3%
3282565 7579.1.1.118 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, FrsA-like 0.61 52.0 3.08e-01 100.0% 44.2%
4024621 524.1.1.1 alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.61 48.0 3.35e-01 87.5% 55.2%
4087039 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 50.0 4.36e-01 100.0% 58.7%
4567496 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.61 49.0 4.42e-01 100.0% 68.0%
5026882 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.61 50.0 4.39e-01 100.0% 61.3%
3940062 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 47.0 2.92e-01 89.6% 57.5%
3716557 75.1.1.1 beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Pro_isomerase 0.60 53.0 3.36e-01 100.0% 59.2%
5044029 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.60 48.0 4.03e-01 95.8% 51.2%
3478289 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 46.0 4.61e-01 100.0% 96.0%
4212763 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.58 45.0 3.79e-01 100.0% 49.4%
3381794 207.1.1.57 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6,LRR_8 0.58 48.0 2.62e-01 93.8% 4.5%
3268629 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.39e-01 100.0% 80.0%
3915100 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.57 52.0 3.56e-01 100.0% 46.9%
3324101 207.1.1.47 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_6 0.57 46.0 2.66e-01 89.6% 10.4%
3369483 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.57 51.0 3.18e-01 100.0% 24.4%
5013819 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.57 47.0 4.37e-01 100.0% 80.0%
4880634 223.3.1.1 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.56 42.0 3.97e-01 83.3% 96.6%
3797522 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 3.75e-01 95.8% 54.0%
3628907 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.56 47.0 2.56e-01 95.8% 33.4%
3381391 207.1.1.55 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.56 47.0 2.85e-01 93.8% 14.2%
3834238 2003.1.5.14 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 0.56 48.0 3.01e-01 100.0% 28.3%
4950627 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.55 44.0 3.33e-01 100.0% 34.7%
3519344 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.55 46.0 2.82e-01 89.6% 34.2%
3174361 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.55 48.0 3.10e-01 100.0% 30.7%
4974589 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.54 41.0 3.70e-01 100.0% 54.8%
3356481 386.1.1.117 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.54 47.0 3.93e-01 97.9% 88.0%
3611538 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.54 43.0 4.13e-01 100.0% 78.2%
141070 223.3.1.1 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.54 40.0 3.91e-01 87.5% 77.2%
4928190 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.53 47.0 3.87e-01 97.9% 66.7%
4122073 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.53 38.0 3.75e-01 100.0% 72.7%
D2 high residues 154-223
PDB
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xxlA00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.60 42.0 3.83e-01 84.3% 55.4%
1vyiA00 1.20.120.820 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain 0.57 48.0 4.25e-01 100.0% 76.6%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.56 32.0 2.72e-01 91.4% 33.1%
6psyA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 44.0 3.13e-01 88.6% 48.9%
7a0hA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.55 45.0 3.99e-01 100.0% 62.4%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.54 36.0 2.94e-01 70.0% 69.3%
6hj2A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.53 43.0 2.99e-01 95.7% 66.8%
3sigA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 45.0 3.10e-01 98.6% 60.0%
6ks6G01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.52 43.0 2.94e-01 91.4% 25.4%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 42.0 3.70e-01 91.4% 96.4%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
137455 4069.1.1.2 alpha arrays › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › PP_M1 0.57 48.0 4.26e-01 98.6% 78.5%
2863102 4069.1.1.0 alpha arrays › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain 0.57 48.0 4.28e-01 100.0% 78.7%
3523119 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.53 45.0 3.05e-01 100.0% 42.3%
3277795 241.11.1.1 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.53 45.0 3.74e-01 100.0% 94.1%
5023376 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.53 41.0 3.13e-01 88.6% 47.0%
3283003 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.52 37.0 3.41e-01 77.1% 82.7%
3271032 5050.1.1.2 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 0.51 41.0 2.52e-01 90.0% 86.9%