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phosphoprotein
Euk-VirNkolbisson_virus
phosphoprotein__YP_009362191__Nkolbisson_virus__380442
Identity
- Accession:
- YP_009362191 ↗
- Protein ID:
- phosphoprotein
- Kingdom:
- euk
Quality
66.4
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 197-260
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eg7A02 | 3.30.1510.10 | Alpha Beta › 2-Layer Sandwich › Domain 2, N(10)-formyltetrahydrofolate synthetase › Domain 2, N(10)-formyltetrahydrofolate synthetase | 0.56 | 47.0 | 3.93e-01 | 96.9% | 94.1% |
| 1wxpA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 49.0 | 4.42e-01 | 95.3% | 77.4% |
| 3gr3A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 45.0 | 3.13e-01 | 95.3% | 76.5% |
| 3fdfA02 | 6.10.140.550 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 30.0 | 3.24e-01 | 95.3% | 62.5% |
| 2yviA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 47.0 | 4.16e-01 | 96.9% | 76.4% |
| 1gpeA03 | 3.30.560.10 | Alpha Beta › 2-Layer Sandwich › Glucose Oxidase; domain 3 › Glucose Oxidase, domain 3 | 0.52 | 42.0 | 2.83e-01 | 98.4% | 83.1% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 41.0 | 3.45e-01 | 100.0% | 72.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3808054 | 148.1.3.205 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_At3g28540 | 0.65 | 45.0 | 4.29e-01 | 85.9% | 61.3% |
| 3213226 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.59 | 37.0 | 3.74e-01 | 100.0% | 61.5% |
| 4030181 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.58 | 40.0 | 3.06e-01 | 75.0% | 81.2% |
| 4114475 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.57 | 46.0 | 2.94e-01 | 85.9% | 98.3% |
| 3397878 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.53 | 40.0 | 2.53e-01 | 84.4% | 94.1% |
| 3208973 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.52 | 41.0 | 3.40e-01 | 85.9% | 71.1% |
| 3680555 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.52 | 33.0 | 3.03e-01 | 100.0% | 44.2% |
D2
medium
residues 104-172
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5j62B00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.65 | 54.0 | 3.88e-01 | 91.3% | 81.3% |
| 1tj7A02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.64 | 49.0 | 3.23e-01 | 81.2% | 95.0% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.64 | 46.0 | 3.37e-01 | 75.4% | 98.4% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.64 | 47.0 | 4.27e-01 | 76.8% | 86.7% |
| 3ge5A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.62 | 50.0 | 3.82e-01 | 89.9% | 73.9% |
| 3bm1A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 48.0 | 3.67e-01 | 89.9% | 79.7% |
| 1b7yB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 45.0 | 3.27e-01 | 78.3% | 76.4% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.60 | 44.0 | 3.69e-01 | 76.8% | 62.6% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.59 | 42.0 | 3.96e-01 | 75.4% | 64.0% |
| 4g6vA00 | 3.40.1350.120 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 46.0 | 3.76e-01 | 89.9% | 98.5% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 37.0 | 3.61e-01 | 72.5% | 96.3% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 39.0 | 3.69e-01 | 76.8% | 67.5% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.55e-01 | 91.3% | 74.2% |
| 3l20A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 35.0 | 2.73e-01 | 72.5% | 70.8% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028003 | 327.6.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU | 0.70 | 48.0 | 3.60e-01 | 72.5% | 77.1% |
| 3614630 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.69 | 59.0 | 3.75e-01 | 94.2% | 28.8% |
| 4381451 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.67 | 55.0 | 3.68e-01 | 91.3% | 34.3% |
| 3466238 | 206.1.1.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 | 0.67 | 51.0 | 3.11e-01 | 82.6% | 42.2% |
| 4984581 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.67 | 46.0 | 3.46e-01 | 72.5% | 42.4% |
| 5053388 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.66 | 57.0 | 3.75e-01 | 98.6% | 34.2% |
| 3719754 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 45.0 | 3.13e-01 | 73.9% | 56.8% |
| 5067778 | 222.1.1.8 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 | 0.64 | 47.0 | 3.77e-01 | 78.3% | 97.1% |
| 3591240 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 47.0 | 3.28e-01 | 78.3% | 65.1% |
| 3333815 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.63 | 49.0 | 3.27e-01 | 85.5% | 43.7% |
| 3791595 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.63 | 49.0 | 4.22e-01 | 82.6% | 87.6% |
| 3860616 | 3694.1.1.1 ↗ | alpha bundles › Tail specific protease helical domain › Tail specific protease helical domain › Tail specific protease helical domain › Peptidase_S41_N | 0.62 | 43.0 | 3.91e-01 | 71.0% | 75.6% |
| 4196390 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.62 | 46.0 | 3.72e-01 | 79.7% | 45.2% |
| 3993183 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.61 | 48.0 | 4.52e-01 | 84.1% | 98.8% |
| 4019332 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.61 | 44.0 | 4.04e-01 | 76.8% | 100.0% |
| 4659427 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.60 | 45.0 | 3.28e-01 | 82.6% | 92.9% |
| 4972277 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.59 | 45.0 | 4.30e-01 | 79.7% | 90.0% |
| 3877645 | 5001.1.1.3 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 | 0.58 | 50.0 | 3.41e-01 | 100.0% | 82.1% |
| 4943269 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.58 | 51.0 | 3.55e-01 | 100.0% | 90.0% |
| 4595166 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.57 | 42.0 | 3.00e-01 | 81.2% | 46.2% |
| 3937690 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 47.0 | 3.19e-01 | 100.0% | 80.6% |
| 4434853 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.56 | 39.0 | 2.71e-01 | 71.0% | 28.7% |
| 4976965 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 43.0 | 3.75e-01 | 82.6% | 77.1% |
| 4940432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 42.0 | 3.84e-01 | 82.6% | 87.8% |
| 4872718 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.53 | 41.0 | 3.86e-01 | 82.6% | 80.2% |
| 4963939 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 31.0 | 3.23e-01 | 76.8% | 60.0% |
| 3647910 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.53 | 34.0 | 3.85e-01 | 71.0% | 90.0% |
| 2609 | 101.1.2.38 ↗ | alpha arrays › HTH › HTH › winged helix domain › RTP | 0.52 | 42.0 | 3.55e-01 | 91.3% | 74.2% |
| 3620820 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 3.41e-01 | 94.2% | 56.6% |
| 5066743 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 4.00e-01 | 94.2% | 98.8% |
| 3579786 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 3.52e-01 | 85.5% | 91.8% |