Back to structures

phosphoprotein

Euk-Vir

Ohlsdorf_virus

phosphoprotein__YP_010086783__Ohlsdorf_virus__2040592

Identity

Accession:
YP_010086783 ↗
Protein ID:
phosphoprotein
Kingdom:
euk

Quality

47.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 184-259
PDB
D2 high residues 322-384
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e3vA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 52.0 4.37e-01 100.0% 44.7%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 47.0 4.02e-01 100.0% 46.5%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 49.0 3.73e-01 100.0% 34.4%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.63 42.0 4.23e-01 100.0% 68.2%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 49.0 4.05e-01 100.0% 48.3%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 3.69e-01 100.0% 40.1%
1rmdA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 30.0 3.52e-01 84.1% 93.3%
2pjyC00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.56 41.0 3.86e-01 100.0% 63.3%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.55 39.0 3.00e-01 100.0% 29.9%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.54 38.0 3.48e-01 100.0% 53.3%
4me3A03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.53 40.0 4.26e-01 100.0% 94.5%
7yugA01 1.10.10.2590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain 0.52 44.0 3.74e-01 100.0% 69.9%
6muwN00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 40.0 2.93e-01 93.7% 90.2%
3q8pB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 42.0 3.69e-01 100.0% 60.2%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.51 43.0 3.95e-01 98.4% 71.1%
2kpqA01 6.10.250.730 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 35.0 3.40e-01 74.6% 93.2%
5o60c00 2.20.28.120 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 0.51 35.0 3.71e-01 96.8% 95.9%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4478659 3435.1.1.3 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-L 0.66 57.0 3.71e-01 100.0% 24.2%
5055783 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.65 42.0 3.79e-01 71.4% 46.7%
4928637 2498.1.1.6 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 0.62 40.0 2.34e-01 100.0% 7.9%
4103289 3435.1.1.3 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-L 0.60 50.0 3.38e-01 100.0% 23.0%
5022263 322.1.1.2 a+b two layers › HPr-like › HPr-like › HPr-like › 3H 0.60 47.0 3.94e-01 100.0% 49.1%
4379527 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.59 39.0 3.53e-01 100.0% 50.6%
4796557 4012.3.1.0 a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 0.58 44.0 4.48e-01 100.0% 84.1%
3859590 386.1.1.248 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 0.57 39.0 4.26e-01 100.0% 90.0%
4231372 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.57 50.0 4.91e-01 100.0% 97.1%
5032187 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 43.0 4.46e-01 98.4% 96.4%
4448678 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.56 50.0 4.74e-01 100.0% 94.7%
4147528 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.56 50.0 4.88e-01 100.0% 98.6%
3535929 386.1.1.248 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 0.56 39.0 2.85e-01 100.0% 25.7%
4928641 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.56 37.0 3.58e-01 71.4% 57.3%
3613878 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.56 47.0 3.24e-01 100.0% 90.2%
5068178 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.55 46.0 4.10e-01 100.0% 64.2%
4943640 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 37.0 3.03e-01 71.4% 91.7%
4990345 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 38.0 4.13e-01 100.0% 96.0%
3539015 4357.1.1.5 beta barrels › WWE domain › WWE domain › WWE domain › WWE_4 0.54 47.0 3.82e-01 100.0% 54.8%
4987387 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.54 45.0 3.32e-01 98.4% 58.4%
4952203 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.54 44.0 3.13e-01 98.4% 54.0%
2723970 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.54 44.0 3.61e-01 100.0% 48.8%
142425 11.1.1.58 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-APP,V-set 0.53 40.0 3.25e-01 100.0% 41.3%
5002387 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.53 42.0 2.84e-01 92.1% 78.2%
3407995 11.1.1.536 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.52 44.0 3.41e-01 100.0% 54.2%
3400241 11.1.1.536 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.52 42.0 3.38e-01 100.0% 57.5%
119231 3108.1.1.1 a+b two layers › Uncharacterized protein Atu1219 › Uncharacterized protein Atu1219 › Uncharacterized protein Atu1219 › DUF982 0.51 38.0 3.32e-01 81.0% 77.0%
4024055 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 44.0 3.18e-01 100.0% 38.4%
4626553 1.1.1.7 beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 0.51 44.0 3.18e-01 100.0% 98.9%
4577561 1.1.1.7 beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 0.51 44.0 3.22e-01 100.0% 98.9%