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pif-1
Euk-VirClostera_anastomosis_granulovirus_Henan
pif-1__YP_008720011__Clostera_anastomosis_granulovirus_Henan__1986291
Identity
- Accession:
- YP_008720011 ↗
- Protein ID:
- pif-1
- Kingdom:
- euk
Quality
77.2
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Betabaculovirus›
Clostera_anastomosis_granulovirus_Henan
TaxID: 1986291
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 389-474
D2
medium
residues 68-208
Domain cluster:
rep: per-os_infectivity_factor__YP_667927__Neodiprion_abietis_NPV__204507__D75-207
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05092.18 best | PIF | 221.9 | 2.40e-65 | 100.0% | 26.6% |
D3
medium
residues 224-310
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05092.18 best | PIF | 101.9 | 5.40e-29 | 100.0% | 15.9% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4futA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.55 | 39.0 | 3.74e-01 | 93.1% | 63.8% |
| 3po3S02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 29.0 | 3.10e-01 | 90.8% | 59.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3309343 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.53 | 30.0 | 3.40e-01 | 90.8% | 80.0% |
| 3360403 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.52 | 30.0 | 3.61e-01 | 85.1% | 96.0% |
D4
medium
residues 311-387_486-519
Domain cluster:
rep: PIF-1__YP_008378392__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D321-415
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05092.18 best | PIF | 72.1 | 5.80e-20 | 95.5% | 14.8% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vh8G01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 29.0 | 3.20e-01 | 88.3% | 67.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961458 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.54 | 42.0 | 3.79e-01 | 82.0% | 88.0% |
| 3612644 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.20e-01 | 73.9% | 87.8% |