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pif-3
Euk-VirMalacosoma_neustria_nucleopolyhedrovirus
pif-3__YP_009552238__Malacosoma_neustria_nucleopolyhedrovirus__38012
Identity
- Accession:
- YP_009552238 ↗
- Protein ID:
- pif-3
- Kingdom:
- euk
Quality
80.2
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Malacosoma_neustria_nucleopolyhedrovirus
TaxID: 38012
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 54-108
D2
medium
residues 109-212
Domain cluster:
rep: PIF-1__YP_010087037__Spodoptera_eridania_nucleopolyhedrovirus__2315721__D120-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05006.18 best | PIF3 | 119.9 | 1.40e-34 | 94.2% | 65.8% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.51 | 36.0 | 3.61e-01 | 92.3% | 70.3% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.50 | 29.0 | 3.02e-01 | 90.4% | 58.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3223403 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.65 | 29.0 | 4.10e-01 | 82.7% | 88.0% |
| None | — | 0.64 | 30.0 | 4.24e-01 | 82.7% | 100.0% | |
| 4466486 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.56 | 29.0 | 3.35e-01 | 80.8% | 68.6% |
| 4000324 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.53 | 28.0 | 3.21e-01 | 80.8% | 68.0% |
| 4976959 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.53 | 27.0 | 3.10e-01 | 81.7% | 65.3% |
| 3423982 | 323.1.1.21 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › GH3 | 0.51 | 39.0 | 2.78e-01 | 83.7% | 71.1% |