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pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00027
Bact-Virpig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00027
Identity
- Kingdom:
- phage
Quality
63.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 56-100_220-324
D2
high
residues 107-210
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nx9A02 | 2.60.40.4390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 60.0 | 5.74e-01 | 100.0% | 85.1% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 41.0 | 4.54e-01 | 97.1% | 92.5% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.59 | 43.0 | 4.49e-01 | 94.2% | 84.4% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 33.0 | 3.72e-01 | 81.7% | 73.7% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 42.0 | 4.14e-01 | 93.3% | 75.7% |
| 2cuhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 4.25e-01 | 99.0% | 88.6% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 44.0 | 4.54e-01 | 95.2% | 91.8% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 46.0 | 4.41e-01 | 91.3% | 84.9% |
| 4bfeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 4.22e-01 | 100.0% | 84.9% |
| 1lvbA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 34.0 | 3.43e-01 | 91.3% | 62.0% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 4.21e-01 | 99.0% | 95.2% |
| 3fl7A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.97e-01 | 99.0% | 88.4% |
| 4wtxA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 4.22e-01 | 98.1% | 88.7% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.87e-01 | 100.0% | 78.4% |
| 5zruA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 4.00e-01 | 98.1% | 96.8% |
| 4dbgA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 37.0 | 4.08e-01 | 84.6% | 95.1% |
| 6brbD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 4.05e-01 | 99.0% | 92.0% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 41.0 | 3.28e-01 | 87.5% | 88.6% |
| 2bs2B01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.51 | 40.0 | 4.04e-01 | 85.6% | 97.2% |
| 1v5oA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 36.0 | 3.70e-01 | 83.7% | 75.5% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 4.06e-01 | 99.0% | 94.3% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.50 | 40.0 | 3.84e-01 | 100.0% | 73.2% |
| 1djxA03 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.50 | 39.0 | 3.67e-01 | 85.6% | 99.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4368682 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.72 | 61.0 | 6.33e-01 | 99.0% | 100.0% |
| 4298574 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.71 | 61.0 | 6.28e-01 | 100.0% | 98.0% |
| 4302659 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.67 | 60.0 | 5.80e-01 | 100.0% | 92.5% |
| 3388281 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.64 | 58.0 | 4.93e-01 | 100.0% | 95.9% |
| 3927107 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.58 | 40.0 | 3.78e-01 | 100.0% | 59.2% |
| 3896652 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 4.36e-01 | 99.0% | 92.9% |
| 3594807 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 48.0 | 3.72e-01 | 100.0% | 49.0% |
| 3858383 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 39.0 | 3.52e-01 | 97.1% | 53.1% |
| 4147155 | 11.22.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Dispersin › Dispersin | 0.54 | 37.0 | 3.97e-01 | 90.4% | 82.2% |
| 3928295 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 47.0 | 3.83e-01 | 100.0% | 66.5% |
| 4932670 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 42.0 | 4.34e-01 | 100.0% | 92.6% |
| 3414319 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.53 | 47.0 | 4.52e-01 | 99.0% | 94.2% |
| 3991167 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.77e-01 | 82.7% | 99.2% |
| 4083103 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.52 | 42.0 | 4.00e-01 | 91.3% | 72.8% |
| 3923079 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 39.0 | 4.10e-01 | 100.0% | 87.4% |
| 4999080 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.96e-01 | 97.1% | 74.2% |
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.52 | 44.0 | 4.15e-01 | 92.3% | 90.4% |
| 3589425 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 45.0 | 3.61e-01 | 96.2% | 87.3% |
| 3411239 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 38.0 | 3.94e-01 | 100.0% | 85.3% |
| 3401334 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.51 | 46.0 | 4.44e-01 | 100.0% | 93.3% |
| 3833138 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.51 | 40.0 | 3.47e-01 | 100.0% | 52.0% |
| 4591842 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 36.0 | 3.62e-01 | 100.0% | 73.3% |
| 3268968 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 4.27e-01 | 98.1% | 95.8% |
D3
high
residues 349-443
Domain cluster:
rep: Filtrate_w_scaffold_1_prodigal-single.1__X__X__00512__D80-191
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 55.0 | 5.40e-01 | 100.0% | 77.9% |
| 4cu7A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 55.0 | 4.57e-01 | 100.0% | 53.3% |
| 3uxfA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 57.0 | 4.77e-01 | 100.0% | 85.5% |
| 5uj6A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 55.0 | 4.73e-01 | 100.0% | 61.8% |
| 4a42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 48.0 | 4.40e-01 | 100.0% | 66.9% |
| 4oi4C01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.58 | 43.0 | 4.54e-01 | 100.0% | 91.7% |
| 2jemA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.58 | 49.0 | 3.86e-01 | 100.0% | 74.1% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 45.0 | 4.17e-01 | 86.3% | 67.2% |
| 1odmA00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.57 | 49.0 | 3.45e-01 | 97.9% | 45.0% |
| 4n2kA01 | 2.60.40.1860 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain | 0.57 | 46.0 | 4.34e-01 | 100.0% | 71.4% |
| 7ekdA01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.57 | 47.0 | 3.30e-01 | 92.6% | 38.9% |
| 1sq4A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 44.0 | 4.08e-01 | 87.4% | 64.3% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 50.0 | 4.54e-01 | 100.0% | 75.9% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 47.0 | 3.61e-01 | 95.8% | 55.8% |
| 1m4wA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.55 | 47.0 | 3.84e-01 | 100.0% | 73.1% |
| 3hnmA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 49.0 | 4.08e-01 | 100.0% | 58.7% |
| 1yb3A00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 45.0 | 3.84e-01 | 100.0% | 53.9% |
| 3gm8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 4.32e-01 | 96.8% | 93.6% |
| 1tq5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 44.0 | 4.07e-01 | 90.5% | 68.8% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 3.89e-01 | 100.0% | 74.7% |
| 1xjaB00 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.54 | 42.0 | 3.67e-01 | 88.4% | 53.2% |
| 1tr8A01 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.53 | 23.0 | 2.93e-01 | 77.9% | 69.2% |
| 2if7B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.92e-01 | 90.5% | 82.8% |
| 1ju3A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 3.54e-01 | 100.0% | 76.1% |
| 2wmpB00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.51 | 45.0 | 4.13e-01 | 100.0% | 76.4% |
| 2kohA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.50 | 42.0 | 4.03e-01 | 92.6% | 93.7% |
| 2uy6C01 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.50 | 45.0 | 3.94e-01 | 100.0% | 76.8% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4971703 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.75 | 53.0 | 5.61e-01 | 100.0% | 82.4% |
| 4971702 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.68 | 51.0 | 5.28e-01 | 100.0% | 84.4% |
| 3364648 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 60.0 | 4.24e-01 | 100.0% | 43.3% |
| 4177953 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.65 | 43.0 | 3.74e-01 | 100.0% | 43.3% |
| 3625196 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.65 | 46.0 | 4.13e-01 | 100.0% | 51.4% |
| 4217963 | 10.32.1.19 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC | 0.64 | 54.0 | 5.21e-01 | 100.0% | 82.9% |
| 4254014 | 10.32.1.19 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC | 0.64 | 54.0 | 5.14e-01 | 100.0% | 79.1% |
| 3718682 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.63 | 54.0 | 4.08e-01 | 97.9% | 68.0% |
| 3274875 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 55.0 | 5.18e-01 | 100.0% | 90.0% |
| 5040068 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 46.0 | 5.09e-01 | 100.0% | 100.0% |
| 3514837 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 52.0 | 4.92e-01 | 100.0% | 77.4% |
| 5025753 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 5.03e-01 | 100.0% | 86.7% |
| 5014778 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 4.40e-01 | 100.0% | 73.0% |
| 4130195 | 10.34.1.1 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain › CLP1_N | 0.60 | 47.0 | 4.84e-01 | 100.0% | 91.1% |
| 3239676 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 53.0 | 5.22e-01 | 96.8% | 95.0% |
| 3538609 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.59 | 53.0 | 4.59e-01 | 100.0% | 73.1% |
| 3629516 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 46.0 | 4.63e-01 | 85.3% | 88.4% |
| 3270524 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.58 | 48.0 | 4.26e-01 | 89.5% | 97.0% |
| 3223710 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 52.0 | 4.24e-01 | 100.0% | 57.7% |
| 3356214 | 10.12.1.16 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy | 0.58 | 48.0 | 3.82e-01 | 94.7% | 63.0% |
| 5039604 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 50.0 | 4.98e-01 | 100.0% | 94.0% |
| 3551326 | 10.32.1.42 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PINIT | 0.57 | 51.0 | 4.36e-01 | 100.0% | 77.4% |
| 3219455 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.57 | 50.0 | 4.63e-01 | 100.0% | 86.4% |
| 4954560 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 50.0 | 4.65e-01 | 100.0% | 95.0% |
| 4498130 | 10.12.1.17 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N | 0.56 | 47.0 | 3.44e-01 | 94.7% | 44.8% |
| 5039361 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 49.0 | 4.74e-01 | 100.0% | 98.2% |
| 5056893 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 49.0 | 4.62e-01 | 100.0% | 80.0% |
| 3865427 | 10.1.1.9 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY | 0.56 | 49.0 | 3.90e-01 | 100.0% | 74.5% |
| 3658519 | 10.12.1.16 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy | 0.55 | 48.0 | 4.20e-01 | 100.0% | 94.0% |
| 3391397 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.55 | 43.0 | 4.47e-01 | 84.2% | 97.8% |
| 4409346 | 10.12.1.64 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ExsA_N | 0.55 | 41.0 | 3.58e-01 | 89.5% | 48.8% |
| 4995809 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.55 | 40.0 | 4.16e-01 | 95.8% | 85.9% |
| 1765525 | 3156.1.1.10 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › PAD_N | 0.54 | 45.0 | 4.31e-01 | 95.8% | 86.1% |
| 3945115 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.54 | 42.0 | 3.62e-01 | 87.4% | 50.9% |
| 3552546 | 3156.1.1.10 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › PAD_N | 0.53 | 44.0 | 4.17e-01 | 94.7% | 85.2% |
| 5016526 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 45.0 | 3.61e-01 | 100.0% | 66.3% |
| 3519065 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.51 | 41.0 | 3.72e-01 | 88.4% | 84.4% |
| 5012252 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 42.0 | 3.99e-01 | 89.5% | 88.2% |
| 3273204 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.50 | 42.0 | 4.24e-01 | 98.9% | 91.6% |
D4
high
residues 457-556
Domain cluster:
rep: IMGVR_UViG_3300002821_000004-3300002821-Iso3TCLC_1000013819__D157-192_317-378
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 4.85e-01 | 100.0% | 97.3% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 42.0 | 4.76e-01 | 100.0% | 97.2% |
| 4iykA01 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.60 | 38.0 | 3.93e-01 | 93.0% | 68.5% |
| 4fxtA01 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.59 | 37.0 | 3.93e-01 | 93.0% | 72.1% |
| 1uqwA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.58 | 44.0 | 3.87e-01 | 91.0% | 54.4% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 39.0 | 4.19e-01 | 99.0% | 86.4% |
| 1xocA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.56 | 43.0 | 4.09e-01 | 89.0% | 68.3% |
| 6e4nA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 38.0 | 4.37e-01 | 98.0% | 100.0% |
| 3w57A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 40.0 | 3.87e-01 | 92.0% | 67.6% |
| 4n0rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 4.02e-01 | 100.0% | 84.7% |
| 1neuA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.39e-01 | 100.0% | 83.5% |
| 5a2fA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.27e-01 | 100.0% | 85.8% |
| 6udkD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 46.0 | 4.25e-01 | 100.0% | 85.4% |
| 5k6uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.85e-01 | 100.0% | 81.1% |
| 2nooA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 44.0 | 3.21e-01 | 91.0% | 38.4% |
| 7ok5A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.85e-01 | 100.0% | 83.0% |
| 1dd1A00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 39.0 | 3.09e-01 | 80.0% | 85.1% |
| 3m8uA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.52 | 43.0 | 3.58e-01 | 89.0% | 58.0% |
| 2covG00 | 2.60.40.2450 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain | 0.52 | 35.0 | 3.65e-01 | 100.0% | 78.4% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.55e-01 | 94.0% | 81.2% |
| 1f97A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.78e-01 | 100.0% | 75.2% |
| 5i99A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.64e-01 | 100.0% | 76.8% |
| 4npjB01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 39.0 | 3.52e-01 | 99.0% | 58.6% |
| 4qflA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.51 | 43.0 | 3.61e-01 | 92.0% | 58.5% |
| 3nsjA02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 40.0 | 3.74e-01 | 100.0% | 67.2% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 33.0 | 3.33e-01 | 89.0% | 64.7% |
| 3jzyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.50 | 39.0 | 3.69e-01 | 99.0% | 67.7% |
| 1mkfA01 | 2.60.40.1330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 45.0 | 3.62e-01 | 100.0% | 62.3% |
| 5g47A01 | 2.60.40.3770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 37.0 | 3.99e-01 | 97.0% | 92.8% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4096826 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.82 | 77.0 | 7.43e-01 | 100.0% | 100.0% |
| 2083577 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.82 | 76.0 | 7.02e-01 | 100.0% | 98.4% |
| 2541716 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.79 | 73.0 | 7.05e-01 | 100.0% | 97.3% |
| 4481648 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.78 | 72.0 | 6.78e-01 | 100.0% | 97.5% |
| 4095714 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.78 | 72.0 | 6.96e-01 | 100.0% | 98.2% |
| 3839595 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.78 | 71.0 | 6.90e-01 | 100.0% | 95.5% |
| 4528715 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.77 | 71.0 | 6.81e-01 | 100.0% | 99.1% |
| 3947227 | 3019.1.1.10 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › PF29548 | 0.77 | 69.0 | 6.75e-01 | 100.0% | 99.1% |
| 3518080 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.76 | 69.0 | 6.42e-01 | 100.0% | 95.2% |
| 4456474 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.73 | 65.0 | 6.36e-01 | 99.0% | 100.0% |
| 3166067 | 3019.1.1.7 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_domII | 0.68 | 62.0 | 6.13e-01 | 100.0% | 98.1% |
| 5050539 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 43.0 | 4.86e-01 | 100.0% | 95.7% |
| 4994579 | 304.59.1.0 ↗ | a+b two layers › Alpha-beta plaits › MTH889-like › MTH889-like | 0.61 | 41.0 | 4.67e-01 | 100.0% | 98.6% |
| 3661880 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.60 | 30.0 | 3.57e-01 | 76.0% | 70.8% |
| 4006107 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.57 | 39.0 | 4.31e-01 | 99.0% | 93.3% |
| 3942221 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 39.0 | 4.31e-01 | 99.0% | 93.3% |
| 3704138 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 43.0 | 4.33e-01 | 100.0% | 81.0% |
| 3606868 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 40.0 | 3.71e-01 | 92.0% | 58.5% |
| 5013743 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 39.0 | 4.45e-01 | 96.0% | 98.7% |
| 3483865 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.55 | 49.0 | 4.67e-01 | 100.0% | 96.7% |
| 5014637 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 40.0 | 4.09e-01 | 100.0% | 79.0% |
| 3939594 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.54 | 48.0 | 4.64e-01 | 100.0% | 97.4% |
| 3623916 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.54 | 49.0 | 4.53e-01 | 100.0% | 91.2% |
| 3899992 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 39.0 | 3.49e-01 | 92.0% | 53.1% |
| 3360474 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 38.0 | 3.18e-01 | 91.0% | 42.5% |
| 4280799 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.53 | 47.0 | 4.44e-01 | 100.0% | 91.2% |
| 4126654 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.53 | 45.0 | 4.44e-01 | 95.0% | 97.3% |
| 3327951 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 38.0 | 3.24e-01 | 92.0% | 45.5% |
| 3230909 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.52 | 47.0 | 4.42e-01 | 100.0% | 94.2% |
| 4609844 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 43.0 | 4.33e-01 | 100.0% | 92.0% |
| 4954634 | 11.1.1.237 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 | 0.52 | 38.0 | 4.16e-01 | 100.0% | 95.0% |
| 3799718 | 11.2.1.25 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PL48 | 0.52 | 39.0 | 2.95e-01 | 100.0% | 32.0% |
| 3631712 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 37.0 | 3.36e-01 | 92.0% | 53.1% |
| 5069810 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.51 | 35.0 | 3.85e-01 | 96.0% | 88.7% |
| 4015002 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 37.0 | 3.40e-01 | 92.0% | 56.3% |
| 1866043 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 36.0 | 3.74e-01 | 97.0% | 77.9% |
| 3705689 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 39.0 | 3.64e-01 | 99.0% | 63.8% |
| 3804239 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 36.0 | 3.74e-01 | 100.0% | 77.9% |
| 3582793 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 35.0 | 3.68e-01 | 100.0% | 80.0% |
| 3906392 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 39.0 | 3.58e-01 | 99.0% | 62.3% |
| 3762908 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 40.0 | 3.53e-01 | 100.0% | 57.3% |
| 3833687 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 39.0 | 3.49e-01 | 100.0% | 57.2% |
| 3935717 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 38.0 | 3.38e-01 | 99.0% | 54.0% |
| 3615468 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 41.0 | 3.62e-01 | 88.0% | 68.3% |
D5
high
residues 567-607_739-804
Domain cluster:
rep: NC_062752.1__YP_010357322.1__M1M30_gp073__00073__D11-52_214-282
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v4eA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.70 | 64.0 | 4.61e-01 | 98.1% | 62.5% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.68 | 61.0 | 4.58e-01 | 98.1% | 70.7% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 41.0 | 4.52e-01 | 72.0% | 78.2% |
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.64 | 37.0 | 3.74e-01 | 75.7% | 57.1% |
| 4fp4A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.64 | 57.0 | 4.40e-01 | 100.0% | 70.8% |
| 6dlzA01 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.64 | 46.0 | 3.85e-01 | 74.8% | 69.1% |
| 2kbbA00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.63 | 48.0 | 4.13e-01 | 82.2% | 88.5% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.62 | 45.0 | 4.43e-01 | 74.8% | 92.0% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.62 | 42.0 | 3.50e-01 | 70.1% | 67.8% |
| 8ex5A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.61 | 42.0 | 3.31e-01 | 71.0% | 56.3% |
| 8befJ01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.61 | 38.0 | 3.27e-01 | 82.2% | 38.8% |
| 1dtoA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.61 | 44.0 | 4.51e-01 | 82.2% | 77.5% |
| 3ucaA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.61 | 54.0 | 4.07e-01 | 100.0% | 47.4% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.61 | 42.0 | 4.09e-01 | 72.9% | 81.5% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 41.0 | 4.49e-01 | 83.2% | 86.2% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 46.0 | 3.35e-01 | 81.3% | 29.5% |
| 7kdfB01 | 1.10.418.60 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Nuf2 subunit | 0.60 | 37.0 | 3.35e-01 | 72.0% | 45.2% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 42.0 | 4.55e-01 | 86.0% | 85.7% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.60 | 38.0 | 4.18e-01 | 92.5% | 78.7% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.60 | 44.0 | 3.95e-01 | 100.0% | 55.4% |
| 2jexA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.59 | 41.0 | 4.34e-01 | 96.3% | 79.2% |
| 3tc1B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.58 | 51.0 | 3.75e-01 | 100.0% | 57.0% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 49.0 | 4.37e-01 | 94.4% | 87.4% |
| 7f16R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 43.0 | 3.19e-01 | 80.4% | 32.1% |
| 3mfnB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 40.0 | 3.81e-01 | 73.8% | 62.7% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 42.0 | 3.92e-01 | 77.6% | 72.3% |
| 3lomA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.56 | 50.0 | 3.70e-01 | 100.0% | 41.7% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.56 | 50.0 | 4.11e-01 | 98.1% | 80.3% |
| 2iakA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 3.30e-01 | 75.7% | 66.7% |
| 4x28C03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 46.0 | 4.21e-01 | 94.4% | 92.3% |
| 5af7B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 46.0 | 4.15e-01 | 96.3% | 93.2% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 38.0 | 3.53e-01 | 78.5% | 59.8% |
| 3tixA02 | 6.10.140.1690 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 33.0 | 3.83e-01 | 74.8% | 86.1% |
| 1st6A04 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.52 | 39.0 | 3.87e-01 | 82.2% | 73.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.52 | 41.0 | 4.02e-01 | 85.0% | 93.2% |
| 7c4sB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 44.0 | 3.39e-01 | 99.1% | 54.3% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.51 | 45.0 | 3.71e-01 | 92.5% | 56.1% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 42.0 | 3.81e-01 | 89.7% | 72.7% |
| 7smtA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.51 | 39.0 | 3.36e-01 | 81.3% | 83.3% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 40.0 | 4.01e-01 | 86.0% | 94.6% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.50 | 44.0 | 3.58e-01 | 95.3% | 96.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004297 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.68 | 61.0 | 6.19e-01 | 98.1% | 100.0% |
| 3471420 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.68 | 48.0 | 5.00e-01 | 80.4% | 78.0% |
| 3785454 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.66 | 49.0 | 5.03e-01 | 77.6% | 94.3% |
| 3242356 | 605.4.1.19 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF30187 | 0.65 | 45.0 | 4.88e-01 | 74.8% | 85.6% |
| 3405975 | 633.21.1.42 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF4781 | 0.61 | 44.0 | 3.70e-01 | 76.6% | 50.8% |
| 3704641 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 54.0 | 4.08e-01 | 99.1% | 63.6% |
| 4952876 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 41.0 | 4.45e-01 | 73.8% | 85.6% |
| 3614747 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.59 | 53.0 | 4.00e-01 | 99.1% | 79.2% |
| 3169716 | 2004.1.1.567 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 | 0.59 | 47.0 | 2.71e-01 | 85.0% | 25.8% |
| 3215718 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.58 | 41.0 | 4.64e-01 | 78.5% | 97.5% |
| 4058767 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.58 | 50.0 | 4.51e-01 | 91.6% | 86.4% |
| 3962012 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.57 | 40.0 | 4.30e-01 | 92.5% | 82.1% |
| 3815546 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.56 | 43.0 | 3.85e-01 | 100.0% | 56.8% |
| 4941521 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.56 | 42.0 | 4.45e-01 | 82.2% | 90.5% |
| 3479320 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.55 | 44.0 | 3.59e-01 | 88.8% | 98.7% |
| 5030139 | 633.22.1.1 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › VKOR | 0.55 | 41.0 | 3.81e-01 | 78.5% | 68.1% |
| 3596222 | 3930.2.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in endoribonuclease Dicer › Helical bundle in endoribonuclease Dicer | 0.55 | 40.0 | 4.10e-01 | 89.7% | 79.0% |
| 4956279 | 633.13.1.1 ↗ | alpha bundles › Bromodomain-like › DsbB-like › DsbB-like › DsbB | 0.55 | 47.0 | 4.23e-01 | 90.7% | 82.1% |
| 3792012 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 37.0 | 4.04e-01 | 92.5% | 84.4% |
| 5057381 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 39.0 | 4.33e-01 | 95.3% | 94.1% |
| 3178532 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.54 | 47.0 | 3.61e-01 | 100.0% | 41.6% |
| 3639700 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.54 | 48.0 | 3.35e-01 | 98.1% | 67.5% |
| 4878354 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.54 | 37.0 | 3.98e-01 | 92.5% | 83.7% |
| 3487803 | 3890.1.1.0 ↗ | alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins | 0.54 | 43.0 | 3.32e-01 | 93.5% | 39.9% |
| 5051764 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.53 | 45.0 | 3.95e-01 | 96.3% | 62.6% |
| 4013285 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.53 | 47.0 | 3.68e-01 | 100.0% | 75.4% |
| 3924045 | 102.1.3.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › DZF_C | 0.53 | 46.0 | 4.37e-01 | 97.2% | 86.2% |
| 4993526 | 101.11.1.13 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › EMC6_arch | 0.53 | 29.0 | 3.15e-01 | 71.0% | 62.5% |
| 3730963 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 46.0 | 3.10e-01 | 100.0% | 53.9% |
| 4031043 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.52 | 42.0 | 4.04e-01 | 86.0% | 85.8% |
| 3253260 | 5069.1.3.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › CybS | 0.51 | 38.0 | 3.85e-01 | 82.2% | 78.0% |
| 3514794 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.50 | 38.0 | 3.69e-01 | 86.0% | 70.8% |
| 3490233 | 109.26.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_NUP160_120_M | 0.50 | 46.0 | 3.73e-01 | 100.0% | 55.5% |
| 3938278 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 44.0 | 3.13e-01 | 95.3% | 34.3% |
| 4937747 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.50 | 44.0 | 3.32e-01 | 99.1% | 42.9% |
| 5074225 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.50 | 38.0 | 4.12e-01 | 86.9% | 96.7% |
D6
high
residues 610-673_695-737
D7
medium
residues 1-55