←Back to structures
pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00065
Bact-Virpig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00065
Identity
- Kingdom:
- phage
Quality
65.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-84
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.73 | 55.0 | 3.77e-01 | 81.6% | 51.5% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.72 | 53.0 | 3.80e-01 | 81.6% | 45.3% |
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.72 | 53.0 | 3.80e-01 | 81.6% | 45.3% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.67 | 51.0 | 3.75e-01 | 85.7% | 53.9% |
| 1a6sA00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.67 | 48.0 | 4.19e-01 | 83.7% | 60.9% |
| 3pfyA02 | 6.10.20.180 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.66 | 49.0 | 4.71e-01 | 81.6% | 89.5% |
| 2jhnA03 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.52 | 35.0 | 3.43e-01 | 75.5% | 81.7% |
| 4fdyA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.52 | 39.0 | 2.79e-01 | 83.7% | 36.6% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 41.0 | 3.44e-01 | 91.8% | 58.2% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.88 | 80.0 | 7.00e-01 | 100.0% | 70.0% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 77.0 | 7.10e-01 | 100.0% | 77.4% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 71.0 | 6.89e-01 | 100.0% | 81.8% |
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 72.0 | 6.96e-01 | 100.0% | 83.6% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 70.0 | 6.80e-01 | 100.0% | 83.6% |
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 66.0 | 6.83e-01 | 95.9% | 97.8% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.79 | 66.0 | 6.36e-01 | 100.0% | 83.6% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.78 | 64.0 | 6.43e-01 | 98.0% | 92.0% |
| 2429119 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.73 | 55.0 | 3.76e-01 | 81.6% | 51.5% |
| 3715701 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.72 | 54.0 | 3.71e-01 | 81.6% | 41.8% |
| 3840704 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.71 | 53.0 | 3.57e-01 | 81.6% | 35.2% |
| 3993036 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.71 | 53.0 | 3.87e-01 | 81.6% | 50.4% |
| 2429116 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.70 | 52.0 | 3.69e-01 | 81.6% | 44.9% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.66 | 55.0 | 5.28e-01 | 100.0% | 81.7% |
| 5039498 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 49.0 | 3.36e-01 | 100.0% | 28.8% |
| 4994965 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 46.0 | 3.12e-01 | 100.0% | 26.1% |
| 2086897 | 7579.1.1.94 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, Peptidase_S15 | 0.58 | 42.0 | 2.75e-01 | 83.7% | 69.8% |
| 5059226 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.53 | 40.0 | 3.62e-01 | 91.8% | 68.8% |
| 1806509 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.50 | 37.0 | 3.10e-01 | 83.7% | 49.0% |
| 4637985 | 221.1.1.35 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Urm1 | 0.50 | 39.0 | 3.39e-01 | 100.0% | 78.9% |