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pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00106

Bact-Vir

pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00106

Identity

Kingdom:
phage

Quality

76.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-107
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00166.27 best Cpn10 28.4 1.90e-06 100.0% 90.3%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p3hB00 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.69 58.0 5.76e-01 100.0% 87.8%
6mrc100 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.67 56.0 5.51e-01 100.0% 85.0%
1wqsA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 29.0 3.38e-01 96.9% 61.4%
2d8iA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.59 40.0 4.20e-01 100.0% 77.3%
2eaqA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 36.0 3.78e-01 100.0% 75.3%
2v90C00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 37.0 3.78e-01 100.0% 76.3%
5f67B00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 36.0 3.63e-01 100.0% 73.2%
7jsnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 42.0 3.38e-01 93.8% 64.1%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3674955 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.74 49.0 5.42e-01 100.0% 82.5%
2794379 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.72 57.0 5.75e-01 100.0% 84.2%
4182470 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.71 59.0 6.02e-01 100.0% 89.4%
3594024 236.1.2.0 beta barrels › GroES-like › GroES-related › GroES 0.71 56.0 5.79e-01 100.0% 88.9%
4417276 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.69 61.0 6.09e-01 100.0% 91.0%
4029028 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.68 57.0 5.67e-01 100.0% 86.0%
4082853 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.67 55.0 5.60e-01 100.0% 89.4%
4341607 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.67 56.0 5.56e-01 100.0% 86.7%
4378688 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.66 54.0 5.51e-01 100.0% 89.5%
3938500 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.65 53.0 5.54e-01 99.0% 93.3%
4173931 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.65 53.0 5.40e-01 100.0% 89.5%
4024554 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.61 52.0 5.24e-01 100.0% 89.8%
3908765 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.57 39.0 3.95e-01 100.0% 71.6%
3579002 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.56 49.0 3.96e-01 100.0% 50.3%
3417079 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.56 40.0 4.19e-01 100.0% 81.1%
3489727 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.56 38.0 4.16e-01 100.0% 86.3%
3274176 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.55 47.0 3.90e-01 100.0% 52.7%
3906429 7.1.1.10 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 0.55 38.0 3.89e-01 100.0% 73.7%
3925496 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 36.0 3.72e-01 94.8% 77.8%
4319678 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.51 46.0 3.96e-01 100.0% 80.0%
3797696 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.51 38.0 3.73e-01 100.0% 73.3%
3936798 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.50 38.0 3.70e-01 100.0% 73.3%