←Back to structures
pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00238
Bact-Virpig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00238
Identity
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-39
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ltoA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.91 | 78.0 | 5.22e-01 | 100.0% | 26.9% |
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.86 | 75.0 | 5.06e-01 | 100.0% | 27.6% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.86 | 75.0 | 5.44e-01 | 100.0% | 36.6% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.85 | 72.0 | 4.47e-01 | 100.0% | 17.7% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.82 | 72.0 | 5.74e-01 | 100.0% | 53.3% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.80 | 66.0 | 5.04e-01 | 100.0% | 39.4% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.79 | 67.0 | 5.08e-01 | 100.0% | 40.2% |
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 60.0 | 5.37e-01 | 94.6% | 60.0% |
| 6he1B01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.77 | 64.0 | 5.51e-01 | 100.0% | 70.3% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.77 | 64.0 | 5.31e-01 | 100.0% | 56.3% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.76 | 62.0 | 5.48e-01 | 100.0% | 67.8% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.76 | 63.0 | 5.78e-01 | 100.0% | 71.2% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 63.0 | 5.35e-01 | 97.3% | 57.1% |
| 2f93B00 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 60.0 | 5.52e-01 | 100.0% | 74.5% |
| 1cpyA02 | 1.10.287.410 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 54.0 | 4.65e-01 | 100.0% | 50.0% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 52.0 | 4.77e-01 | 97.3% | 83.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4949979 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.89 | 77.0 | 6.45e-01 | 100.0% | 56.9% |
| 5016327 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.88 | 76.0 | 6.16e-01 | 100.0% | 52.9% |
| 3280288 | 5011.1.1.0 ↗ | extended segments › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa | 0.88 | 75.0 | 7.06e-01 | 100.0% | 80.0% |
| 5035400 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.85 | 72.0 | 5.07e-01 | 100.0% | 30.8% |
| 4977024 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.83 | 73.0 | 5.18e-01 | 100.0% | 35.5% |
| 4640528 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.81 | 66.0 | 6.54e-01 | 100.0% | 92.5% |
| 3296006 | 104.1.1.0 ↗ | alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain | 0.77 | 65.0 | 5.99e-01 | 100.0% | 78.0% |
| 4319920 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.71 | 57.0 | 3.26e-01 | 97.3% | 74.0% |