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pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00329

Bact-Vir

pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00329

Identity

Kingdom:
phage

Quality

72.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-106
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gl6A01 3.10.450.570 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain 0.62 42.0 4.58e-01 87.6% 87.8%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 4.47e-01 91.4% 73.3%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.59 49.0 4.66e-01 92.4% 83.2%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 38.0 3.97e-01 78.1% 71.1%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 4.12e-01 75.2% 94.4%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.56 43.0 4.62e-01 99.0% 97.8%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 3.95e-01 81.9% 66.7%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 42.0 3.62e-01 82.9% 60.0%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 3.82e-01 83.8% 82.1%
2daxA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.53 41.0 3.72e-01 81.9% 63.1%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.52 44.0 4.45e-01 93.3% 98.0%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.52 40.0 3.78e-01 82.9% 94.0%
4ic6C01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 40.0 4.01e-01 85.7% 89.1%
2oktA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 41.0 3.87e-01 86.7% 75.8%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3291529 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 37.0 3.68e-01 82.9% 53.7%
3284679 243.1.1.80 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 0.64 48.0 4.70e-01 93.3% 73.0%
4124096 809.1.1.1 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA 0.62 37.0 4.19e-01 86.7% 77.5%
3451388 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 45.0 3.30e-01 77.1% 99.6%
4262043 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 38.0 4.24e-01 80.0% 82.5%
3998091 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.60 36.0 4.33e-01 88.6% 96.9%
3813686 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 41.0 3.05e-01 70.5% 98.9%
3788193 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.60 44.0 3.87e-01 88.6% 52.3%
78 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.59 49.0 4.66e-01 92.4% 83.2%
3660221 60.1.1.0 ↗ beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain 0.58 43.0 3.78e-01 79.0% 61.4%
5040360 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 43.0 4.53e-01 80.0% 89.5%
3197818 295.1.1.30 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Cyto_heme_lyase 0.56 45.0 3.94e-01 86.7% 72.4%
4006548 331.19.1.2 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N 0.54 44.0 4.59e-01 100.0% 96.8%
3629315 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.14e-01 75.2% 52.4%
3912181 2004.1.1.174 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Elong_Iki1 0.52 39.0 3.10e-01 79.0% 97.3%
4946190 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 39.0 3.95e-01 97.1% 80.0%
3185222 868.1.1.4 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › VTC 0.51 42.0 3.07e-01 89.5% 40.0%
3231323 60.1.1.0 ↗ beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain 0.51 38.0 3.55e-01 78.1% 82.2%
1033236 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.51 29.0 3.28e-01 75.2% 75.7%