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pig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00337
Bact-Virpig_ID_2229_F59_scaffold_2_curated_prodigal-single.1__X__X__00337
Identity
- Kingdom:
- phage
Quality
59.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 160-224
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 50.0 | 5.31e-01 | 84.6% | 87.5% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 55.0 | 5.52e-01 | 93.8% | 86.4% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 42.0 | 4.76e-01 | 80.0% | 100.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.64 | 43.0 | 4.95e-01 | 83.1% | 95.8% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 52.0 | 5.17e-01 | 95.4% | 91.3% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 53.0 | 4.08e-01 | 100.0% | 47.7% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.57 | 43.0 | 3.88e-01 | 86.2% | 85.6% |
| 7r3mA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 45.0 | 4.23e-01 | 89.2% | 85.4% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 46.0 | 3.78e-01 | 100.0% | 48.8% |
| 1udlA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 42.0 | 3.70e-01 | 83.1% | 59.2% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 47.0 | 4.30e-01 | 92.3% | 86.7% |
| 5dvhA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 47.0 | 3.50e-01 | 100.0% | 96.2% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 41.0 | 4.22e-01 | 81.5% | 95.2% |
| 2k5fA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 46.0 | 4.35e-01 | 100.0% | 85.5% |
| 2dlpA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 40.0 | 3.73e-01 | 83.1% | 70.6% |
| 2k5iA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.53 | 44.0 | 4.16e-01 | 100.0% | 88.1% |
| 2gzbB00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 44.0 | 3.42e-01 | 100.0% | 97.5% |
| 3aluA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.52 | 39.0 | 3.01e-01 | 81.5% | 70.7% |
| 2rc5B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 45.0 | 3.57e-01 | 100.0% | 94.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4084190 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.69 | 52.0 | 5.42e-01 | 96.9% | 89.8% |
| 3867384 | 4.1.1.50 ↗ | beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 | 0.68 | 56.0 | 5.21e-01 | 89.2% | 90.0% |
| 1442407 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.65 | 57.0 | 4.14e-01 | 100.0% | 35.7% |
| 4213135 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.65 | 57.0 | 4.63e-01 | 100.0% | 53.2% |
| 3404936 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.64 | 44.0 | 4.91e-01 | 83.1% | 92.0% |
| 3374228 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 50.0 | 5.18e-01 | 84.6% | 100.0% |
| 4995677 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 49.0 | 5.24e-01 | 87.7% | 98.2% |
| 4091379 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 5.30e-01 | 95.4% | 94.3% |
| 3441143 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.63 | 55.0 | 4.81e-01 | 100.0% | 73.0% |
| 4944596 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.62 | 54.0 | 4.41e-01 | 100.0% | 67.2% |
| 4019215 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.61 | 51.0 | 5.05e-01 | 92.3% | 92.9% |
| 3812216 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.61 | 51.0 | 5.03e-01 | 92.3% | 90.0% |
| 4598590 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.61 | 52.0 | 5.08e-01 | 93.8% | 91.4% |
| 1145920 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.61 | 44.0 | 4.04e-01 | 86.2% | 59.0% |
| 4021478 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 51.0 | 4.65e-01 | 92.3% | 77.6% |
| 3270324 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.61 | 43.0 | 4.78e-01 | 83.1% | 98.0% |
| 3662319 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.61 | 52.0 | 4.89e-01 | 96.9% | 92.5% |
| 5074039 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 53.0 | 5.06e-01 | 98.5% | 90.7% |
| 3407915 | 4.1.3.2 ↗ | beta barrels › SH3 › SH3 › Calcium-binding protein CcbP › SHCBP_N | 0.60 | 53.0 | 4.14e-01 | 100.0% | 81.4% |
| 4874733 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 44.0 | 4.76e-01 | 83.1% | 94.4% |
| 3556601 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.59 | 51.0 | 5.15e-01 | 98.5% | 93.8% |
| 3779830 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.59 | 50.0 | 4.49e-01 | 96.9% | 66.7% |
| 5033600 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 40.0 | 4.42e-01 | 93.8% | 95.9% |
| 3678872 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.57 | 46.0 | 4.44e-01 | 92.3% | 98.7% |
| 3222210 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.57 | 50.0 | 4.93e-01 | 100.0% | 95.7% |
| 3587555 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 4.21e-01 | 81.5% | 90.0% |
| 3929373 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.57 | 47.0 | 4.87e-01 | 98.5% | 100.0% |
| 3541996 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.56 | 42.0 | 3.06e-01 | 83.1% | 30.5% |
| 3486717 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 48.0 | 4.84e-01 | 96.9% | 100.0% |
| 4058835 | 814.1.1.2 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase | 0.55 | 42.0 | 3.18e-01 | 84.6% | 86.3% |
| 4679625 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 38.0 | 3.94e-01 | 84.6% | 85.0% |
| 3367044 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.53 | 45.0 | 2.98e-01 | 93.8% | 36.2% |
| 4134242 | 4.1.1.129 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_5 | 0.52 | 42.0 | 3.63e-01 | 96.9% | 73.0% |
| 4947695 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 4.21e-01 | 100.0% | 94.7% |
| 4030850 | 4.1.1.165 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6501 | 0.51 | 39.0 | 3.60e-01 | 83.1% | 64.7% |
| 3494172 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.50 | 39.0 | 3.10e-01 | 92.3% | 80.6% |
D2
high
residues 235-299
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zuoA08 | 2.30.30.620 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 39.0 | 4.10e-01 | 96.9% | 62.1% |
| 1sf9A02 | 2.30.30.340 | Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains | 0.65 | 48.0 | 5.15e-01 | 100.0% | 96.3% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.64 | 45.0 | 3.78e-01 | 84.6% | 43.4% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 53.0 | 4.89e-01 | 98.5% | 81.0% |
| 4jrnA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 52.0 | 4.07e-01 | 100.0% | 75.9% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 51.0 | 4.23e-01 | 100.0% | 76.0% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 48.0 | 4.32e-01 | 100.0% | 63.3% |
| 2rhiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 51.0 | 4.23e-01 | 95.4% | 64.3% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.58 | 33.0 | 3.76e-01 | 73.8% | 78.3% |
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.58e-01 | 98.5% | 93.3% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.57 | 47.0 | 4.53e-01 | 90.8% | 97.3% |
| 7oo1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.56 | 40.0 | 3.82e-01 | 98.5% | 63.6% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 38.0 | 3.43e-01 | 73.8% | 90.4% |
| 2vijA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.54 | 38.0 | 3.15e-01 | 78.5% | 74.4% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.53 | 40.0 | 3.42e-01 | 87.7% | 75.6% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 38.0 | 3.90e-01 | 80.0% | 90.3% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 43.0 | 3.95e-01 | 100.0% | 76.6% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.51 | 40.0 | 3.88e-01 | 93.8% | 90.0% |
| 2etnA02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.51 | 41.0 | 3.99e-01 | 90.8% | 100.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3656213 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.75 | 58.0 | 5.26e-01 | 100.0% | 63.5% |
| 5035934 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.72 | 59.0 | 5.95e-01 | 100.0% | 89.2% |
| 1807495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 48.0 | 5.21e-01 | 100.0% | 88.7% |
| 3947337 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.70 | 55.0 | 4.10e-01 | 96.9% | 35.5% |
| 4583465 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.68 | 48.0 | 5.35e-01 | 100.0% | 98.0% |
| 4116754 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.68 | 45.0 | 5.19e-01 | 93.8% | 100.0% |
| 4967397 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.68 | 55.0 | 5.50e-01 | 100.0% | 89.2% |
| 4280256 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.67 | 46.0 | 5.16e-01 | 96.9% | 94.0% |
| 4930861 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.67 | 54.0 | 5.43e-01 | 100.0% | 89.2% |
| 4116921 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.66 | 46.0 | 4.80e-01 | 96.9% | 80.0% |
| 603 | 4.1.1.62 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1811 | 0.66 | 48.0 | 5.16e-01 | 96.9% | 96.2% |
| 4665407 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.65 | 45.0 | 4.96e-01 | 90.8% | 94.0% |
| 4668201 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.65 | 47.0 | 5.15e-01 | 96.9% | 100.0% |
| 3278801 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.65 | 45.0 | 4.59e-01 | 96.9% | 73.8% |
| 4640515 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 44.0 | 4.85e-01 | 90.8% | 92.0% |
| 3964846 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.64 | 46.0 | 4.20e-01 | 95.4% | 57.6% |
| 4963446 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 57.0 | 5.73e-01 | 100.0% | 96.9% |
| 5064548 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.64 | 45.0 | 4.84e-01 | 84.6% | 88.7% |
| 3839849 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.64 | 46.0 | 4.67e-01 | 96.9% | 76.9% |
| 3362593 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.64 | 37.0 | 3.02e-01 | 80.0% | 32.7% |
| 4938828 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 5.03e-01 | 98.5% | 90.0% |
| 3989139 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.62 | 45.0 | 4.51e-01 | 96.9% | 76.9% |
| 3502084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 53.0 | 5.22e-01 | 100.0% | 90.0% |
| 4409482 | 3158.1.1.2 ↗ | beta barrels › uncharacterized protein RUMGNA_01417 › uncharacterized protein RUMGNA_01417 › uncharacterized protein RUMGNA_01417 › DUF2777 | 0.59 | 48.0 | 4.63e-01 | 100.0% | 80.0% |
| 3742052 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.57 | 37.0 | 3.35e-01 | 100.0% | 50.6% |
| 3185323 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.57 | 49.0 | 4.09e-01 | 100.0% | 56.4% |
| 3708283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 48.0 | 4.48e-01 | 100.0% | 94.1% |
| 3460634 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.54 | 48.0 | 3.72e-01 | 100.0% | 68.6% |
| 4032577 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.50 | 36.0 | 2.42e-01 | 78.5% | 17.4% |
D3
medium
residues 25-132