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pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00009

Bact-Vir

pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00009

Identity

Kingdom:
phage

Quality

87.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-80
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.62 36.0 3.98e-01 70.1% 69.8%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 42.0 3.68e-01 100.0% 47.0%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.58 27.0 2.63e-01 90.9% 33.7%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.58 40.0 2.81e-01 72.7% 89.0%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 38.0 3.37e-01 93.5% 45.3%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.54 47.0 3.41e-01 100.0% 41.8%
1jllB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 37.0 2.95e-01 72.7% 63.2%
2d9vA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 36.0 3.26e-01 87.0% 50.9%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 41.0 3.50e-01 92.2% 55.8%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995179 236.3.1.1 ↗ beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 0.57 35.0 3.45e-01 84.4% 56.5%
3398310 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 39.0 3.47e-01 93.5% 48.7%
3925915 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.56 27.0 3.17e-01 90.9% 62.0%
3521698 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 34.0 2.98e-01 88.3% 40.0%
3605922 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 3.78e-01 83.1% 70.0%
3728712 109.4.1.681 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.53 44.0 2.66e-01 89.6% 30.1%
3597002 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 38.0 3.46e-01 77.9% 64.5%
3715477 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.52 36.0 3.03e-01 94.8% 40.7%
3713571 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 39.0 3.55e-01 80.5% 73.3%
150293 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.52 44.0 4.05e-01 90.9% 74.0%
3495085 3174.1.1.2 ↗ beta barrels › Ribosomal protein L14-like › Ribosomal protein L14-related › Ribosomal protein L14-related › Ribosomal_S8e 0.51 35.0 3.02e-01 74.0% 45.0%
3631248 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.51 44.0 3.76e-01 97.4% 59.2%
3531032 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 3.02e-01 93.5% 59.6%
5074282 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 34.0 3.86e-01 72.7% 98.2%
3907178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 34.0 3.09e-01 70.1% 57.1%