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pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00036
Bact-Virpig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00036
Identity
- Kingdom:
- phage
Quality
55.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 91-137
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dfgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 6.23e-01 | 97.9% | 89.6% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 5.07e-01 | 100.0% | 64.4% |
| 1yg2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 5.08e-01 | 95.7% | 65.8% |
| 1d3yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 5.37e-01 | 100.0% | 84.5% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.76e-01 | 100.0% | 58.2% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.84e-01 | 100.0% | 63.5% |
| 2g9wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 5.10e-01 | 97.9% | 76.1% |
| 3s93A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.68 | 57.0 | 4.93e-01 | 100.0% | 72.5% |
| 1re0B02 | 1.10.1000.11 | Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 | 0.68 | 58.0 | 4.46e-01 | 100.0% | 87.0% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.63 | 46.0 | 4.11e-01 | 83.0% | 54.2% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 48.0 | 4.32e-01 | 97.9% | 81.8% |
| 4u7bA01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 47.0 | 4.74e-01 | 100.0% | 92.2% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 46.0 | 4.56e-01 | 95.7% | 90.0% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.59 | 46.0 | 3.18e-01 | 95.7% | 58.7% |
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.59 | 48.0 | 3.95e-01 | 93.6% | 47.8% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 51.0 | 3.91e-01 | 100.0% | 45.0% |
| 2efeA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.58 | 44.0 | 3.82e-01 | 89.4% | 82.7% |
| 1ny9A00 | 1.10.490.50 | Mainly Alpha › Orthogonal Bundle › Globin-like › Antibiotic binding domain of TipA-like multidrug resistance regulators | 0.57 | 45.0 | 3.75e-01 | 93.6% | 67.0% |
| 7crnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 44.0 | 2.88e-01 | 97.9% | 69.6% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 34.0 | 2.42e-01 | 100.0% | 17.9% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 42.0 | 3.92e-01 | 95.7% | 77.6% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.53 | 45.0 | 3.25e-01 | 100.0% | 65.1% |
| 3c8zA02 | 1.20.120.640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.51 | 42.0 | 3.64e-01 | 97.9% | 65.1% |
| 4k35A04 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.50 | 39.0 | 3.88e-01 | 93.6% | 84.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4680590 | 2.21.1.4 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SSO2105_N | 0.78 | 68.0 | 4.46e-01 | 100.0% | 26.2% |
| 3743171 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.77 | 64.0 | 6.03e-01 | 97.9% | 95.0% |
| 3695390 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.77 | 66.0 | 5.62e-01 | 100.0% | 88.7% |
| 3246361 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.77 | 65.0 | 5.93e-01 | 100.0% | 76.9% |
| 3930259 | 592.7.1.0 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain | 0.76 | 66.0 | 5.70e-01 | 100.0% | 74.7% |
| 3223597 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.73 | 61.0 | 5.49e-01 | 100.0% | 80.0% |
| 4963511 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.73 | 61.0 | 4.18e-01 | 100.0% | 31.7% |
| 4946450 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.72 | 61.0 | 5.08e-01 | 100.0% | 65.9% |
| 4945073 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.72 | 61.0 | 5.05e-01 | 100.0% | 64.4% |
| 3220510 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.72 | 60.0 | 5.95e-01 | 100.0% | 94.0% |
| 4945101 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.72 | 60.0 | 4.13e-01 | 100.0% | 32.2% |
| 3930041 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 59.0 | 4.77e-01 | 100.0% | 68.0% |
| 4982868 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 58.0 | 4.89e-01 | 97.9% | 65.9% |
| 5000306 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 57.0 | 4.85e-01 | 97.9% | 72.9% |
| 5051051 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.70 | 58.0 | 4.05e-01 | 100.0% | 33.5% |
| 4932302 | 101.1.2.913 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Lhr | 0.69 | 56.0 | 4.88e-01 | 97.9% | 70.0% |
| 4381449 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 5.05e-01 | 97.9% | 77.1% |
| 3970054 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 51.0 | 5.12e-01 | 100.0% | 84.0% |
| 3929910 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.67 | 54.0 | 3.95e-01 | 100.0% | 34.8% |
| 5032533 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 4.57e-01 | 97.9% | 68.2% |
| 3214724 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.66 | 54.0 | 5.00e-01 | 100.0% | 72.3% |
| 5053286 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.66 | 55.0 | 3.38e-01 | 100.0% | 19.2% |
| 3535287 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.65 | 43.0 | 3.80e-01 | 70.2% | 42.7% |
| 3234099 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.65 | 53.0 | 4.95e-01 | 100.0% | 72.3% |
| 4979555 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.65 | 53.0 | 5.02e-01 | 100.0% | 80.0% |
| 3212366 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.65 | 52.0 | 5.18e-01 | 97.9% | 96.0% |
| 5018899 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 52.0 | 4.88e-01 | 100.0% | 88.9% |
| 5048617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 53.0 | 4.62e-01 | 100.0% | 73.8% |
| 3996957 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.64 | 52.0 | 4.20e-01 | 100.0% | 50.5% |
| 5044345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 52.0 | 4.56e-01 | 100.0% | 72.5% |
| 5070355 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 4.60e-01 | 100.0% | 84.3% |
| 5002758 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.63 | 49.0 | 4.67e-01 | 97.9% | 93.3% |
| 4217857 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 52.0 | 4.74e-01 | 97.9% | 72.3% |
| 5017707 | 101.1.1.548 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 | 0.61 | 48.0 | 4.54e-01 | 100.0% | 84.6% |
| 3937317 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.61 | 48.0 | 4.83e-01 | 100.0% | 94.0% |
| 3275225 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 48.0 | 4.34e-01 | 100.0% | 72.0% |
| 3191841 | 101.1.2.533 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_CYT4 | 0.61 | 48.0 | 4.16e-01 | 100.0% | 62.2% |
| 4105244 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.59 | 47.0 | 4.52e-01 | 100.0% | 78.3% |
| 3433531 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.58 | 47.0 | 3.56e-01 | 100.0% | 43.6% |
| 3634041 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.57 | 45.0 | 2.74e-01 | 100.0% | 50.0% |
| 4278019 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.56 | 43.0 | 3.22e-01 | 100.0% | 38.1% |
| 3261482 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.56 | 43.0 | 3.92e-01 | 97.9% | 64.0% |
| 3658872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.46e-01 | 95.7% | 76.7% |
| 3456236 | 7095.1.1.1 ↗ | alpha arrays › C-terminal domain of DEAH helicase DHX37 › C-terminal domain of DEAH helicase DHX37 › C-terminal domain of DEAH helicase DHX37 › DHX37_C | 0.52 | 43.0 | 3.55e-01 | 100.0% | 87.4% |
D2
medium
residues 3-82