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pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00046
Bact-Virpig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00046
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 214-284
Domain cluster:
rep: MN095770.1__QFR57709.1__CPT_Slocum_152__00129__D178-251
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00533.34 best | BRCT | 36.6 | 6.00e-09 | 97.2% | 83.3% |
D2
medium
residues 43-116
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s1eA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 50.0 | 3.88e-01 | 95.9% | 83.4% |
| 1sxjD02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 45.0 | 4.65e-01 | 82.4% | 91.4% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.53 | 40.0 | 3.75e-01 | 85.1% | 82.8% |
| 1z0xA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 34.0 | 3.53e-01 | 74.3% | 72.7% |
| 1xszA02 | 1.10.1000.11 | Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 | 0.52 | 44.0 | 3.91e-01 | 100.0% | 74.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4098561 | 102.1.1.96 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 | 0.79 | 72.0 | 5.23e-01 | 100.0% | 38.9% |
| 4204484 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.78 | 68.0 | 5.14e-01 | 100.0% | 41.1% |
D3
medium
residues 117-205
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tt5A05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.78 | 63.0 | 6.69e-01 | 91.0% | 100.0% |
| 4at7B01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.64 | 50.0 | 4.45e-01 | 85.4% | 80.5% |
| 3dv9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 40.0 | 4.38e-01 | 93.3% | 100.0% |
| 2vf7A03 | 1.10.8.280 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ABC transporter ATPase domain-like | 0.53 | 39.0 | 3.59e-01 | 80.9% | 88.0% |
| 6tdxG01 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.53 | 40.0 | 3.09e-01 | 82.0% | 90.2% |
| 4py6C00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 41.0 | 3.73e-01 | 86.5% | 97.6% |
| 6j95A01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 43.0 | 2.84e-01 | 96.6% | 78.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4196538 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 63.0 | 7.03e-01 | 86.5% | 100.0% |
| 4447612 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 62.0 | 6.88e-01 | 86.5% | 100.0% |
| 4358944 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.80 | 67.0 | 5.22e-01 | 95.5% | 44.4% |
| 3968017 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.78 | 69.0 | 6.89e-01 | 95.5% | 93.3% |
| 4173803 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.77 | 64.0 | 6.71e-01 | 94.4% | 100.0% |
| 4668260 | 102.1.1.99 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 | 0.77 | 65.0 | 5.07e-01 | 95.5% | 45.0% |
| 4650731 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.76 | 63.0 | 6.59e-01 | 94.4% | 100.0% |
| 4077224 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 60.0 | 6.26e-01 | 89.9% | 96.2% |
| 4608590 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 60.0 | 6.15e-01 | 91.0% | 91.8% |
| None | — | 0.71 | 59.0 | 6.14e-01 | 91.0% | 100.0% | |
| None | — | 0.68 | 54.0 | 5.54e-01 | 91.0% | 89.4% |